Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0436 ATGAAGCCAAGCCAATTACAAAGACGCAGATTCAAATATACGCCCGCTAACTCCGACGCTTTTCTTCTTCATTTTCTTGTGGTGCAACCCACTCGCTACTATACTACTCAGTTCAGTTTTCTACTGCCACAACTCCTTTCAGAAACCAAAAATCTAGGGTTAGGGTTTTTGTTTTTGTTTTGGGGTCACACAGCCATGGAGGCCGCAGTGGTCGACGCCGGCTCAAGCCTCCTCAAGGCCGGTTTCGCAATTCCCGATCAATCTCCCGCATTGATAATTCCCACACAGATGAAGCAGATGCTTGATGATGGATCAGTCACTGATAATCTGGTAGTTGACGATGTTGCCGTCGATCCGGTGGTGAGAGGTTATGTAAGAGATTGGGATGCCATGGAGGATTTGTTGCATTATGTTTTGTACACTGGCCTTGGATGGGAAATAGGCAATGAAGGGCAGATACTATTTACGGATCCACTTTGTACGCCAAAGGCTAACAAAGAACAGTTAGTTCAACTAATGTTTGAAACATTCAACATATCAGGGTTTTATGCCTCAGAACAGGCAGTGTTGTCACTATATGCTGTGGGACGTATCTCCGGATGCACAGTTGATATTGGTCATGGAAAAATAGATATTGCGCCAGTAATTGAAGGTGCTGTTAATCACATTGCCTCAAGAAGATTTGAGTTTGGAGGTATTGATCTAACTAATTTCCTGGCTCAAGAACTTGGCAAATCCAATCCACTAGTGAATATCAGCTTGTCTGATGTTGAGAAAATAAAACAGCAATACTCATGTTGTGCTGAAGATGAATTAGCTTATCAGAAAACCCAAGATTCTTGCCCTGTGGAGAAGCATACCCTTCCTGATGGACAGGTGATAACAATTAGAAGAGAAAGATATACTGTTGGTGAAGCTTTATTCCAGCCAAGTCTATTGGGTTTAGAGACTCATGGCATTGTTGAGCAGCTTGTTCGTACTATTTCAACTGTACCATCTGATAATCATCGGCAACTTCTGGAGAATACTGTGGTTTGTGGTGGCACTTCTTCTATGACTGGGTTTGAAGAGAGATTTCAGAAGGAATCTAGCTTAAGTTCATCTGCTATTCGGCCTACTCTGGTTAAGCCTCCAGAATACATGCCAGAAAATTTAACCACGTATTCTGCATGGGTGGGAGGTGCCATACTTGCCAAAGTAGTTTTTCCTCAAAATCAGCATGTAACTAAGGCAGACTATGATGAAACTGGACCATCTGTTGTTCACCGGAAATGCTTCTGA 1281 0.4278 MKPSQLQRRRFKYTPANSDAFLLHFLVVQPTRYYTTQFSFLLPQLLSETKNLGLGFLFLFWGHTAMEAAVVDAGSSLLKAGFAIPDQSPALIIPTQMKQMLDDGSVTDNLVVDDVAVDPVVRGYVRDWDAMEDLLHYVLYTGLGWEIGNEGQILFTDPLCTPKANKEQLVQLMFETFNISGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVNHIASRRFEFGGIDLTNFLAQELGKSNPLVNISLSDVEKIKQQYSCCAEDELAYQKTQDSCPVEKHTLPDGQVITIRRERYTVGEALFQPSLLGLETHGIVEQLVRTISTVPSDNHRQLLENTVVCGGTSSMTGFEERFQKESSLSSSAIRPTLVKPPEYMPENLTTYSAWVGGAILAKVVFPQNQHVTKADYDETGPSVVHRKCF* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0436 426 SUPERFAMILY Actin-like ATPase domain 196 426 IPR043129 -
Dod10g0436 426 SMART actin_3 66 426 IPR004000 -
Dod10g0436 426 CDD NBD_sugar-kinase_HSP70_actin 69 233 - -
Dod10g0436 426 Gene3D - 70 420 - -
Dod10g0436 426 SUPERFAMILY Actin-like ATPase domain 66 203 IPR043129 -
Dod10g0436 426 Gene3D Actin; Chain A, domain 4 230 317 - -
Dod10g0436 426 PRINTS Actin signature 282 298 IPR004000 -
Dod10g0436 426 PRINTS Actin signature 190 209 IPR004000 -
Dod10g0436 426 PRINTS Actin signature 110 132 IPR004000 -
Dod10g0436 426 PRINTS Actin signature 165 178 IPR004000 -
Dod10g0436 426 PANTHER ACTIN 66 425 IPR004000 -
Dod10g0436 426 PANTHER BNACNNG31150D PROTEIN 66 425 - -
Dod10g0436 426 Pfam Actin 66 426 IPR004000 -
Dod10g0436 426 Gene3D - 188 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0436 Dod-Chr10 14081184 14098292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0436 70 426 Cytoskeleton Gene Families AT3G18780 36.800 3.85e-68 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0436 K16615 - gmx:100794153 684.1