Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0409 ATGGCGGAGTGGCCCCCATCCAAGCGACCCAAAATCGTCAGGGGGGATGATGATTATATGCCTGGAAACATTCTTGAGATTGAGCTTTCTAAGTTCATGACCTTTGATTATTTGAAATGCAAACCCGGGCCTCGTCTTAATCTTGTTGTTGGGCCCAATGGTTCTGGAAAGAGTTCTCTTGTATGTGCTATTGCACTTGGCCTTTGCGGAGAGCCCCAGTTGCTTGGGCGTGCAACTAGTGTTGGGGCATATGTGAAGCGGGGAGAAGAGTCTGGCTATGTTAAGATTACGTTGAGAGGGAACAATAAAGAGGAGCGTATTGACATTACCCGTAATATAAATACTAACAACAAGTCTGAATGGTTGCTAAATGGAAACGTAGTGGCCAAAAGTGATGTAGCTCAAACCATTAAAAGGTTTAACATCCAAGTCAATAACTTGACTCAATTCTTACCACAAGACAGGGTCTGTGAGTTTGCAAAGTTATCTGCTATCCAACTTCTGGAGGAAACTGAAAAGGCTGTTGGTGATCCACAACTTCCAGAGCAACATCGTGCACTAGTTGATAAAAGTCGTGCATTGAAGCATATTGAGCTGTCTGTGGAAAAAAATGAAGGAACTTTGAATCAGTTGAAGGAACGTAATGCTGAACTAGAGAAGGATGTTGAGCGTGTCCGTCAAAGGGATGAGATTCTTGCCAAGGCTGAAACCATGAAAAAGAAATTGCCTTGGCTTCAATATGACATGAAGCAGGCTCAATATCGGGAAGCTAAGGAGCGTGAGAATGATGCAGCAAAGGTGCTGGAGGAAGCTGCAAAGTTATTAAATGATCTTAAAGAGCCTATTAAGAAACAAAAAGAGGAAAAGACTGCATTAGATGCAAAATGTAGAAAGGTTGAAAGCCGCATAAAAGAGAATTTGACGAAGCGAGCTGAACATCTGGAGAAAGAGAACCAATTGGATGTGGACTTGCGAGGCAAGTACAAAGATATGGAAGAGATGAGGAGGCAGGAGGAAACTCAGCAGCAACGACTCATAAAAACTAGGGAGGAACTTGCTGCTTTTGAACTTGAACTTGAGAGTCTAGGTCCTTTTCAACCTCGAACAGATGAGCTTCAAAGACTAAAAGCTGAAATTTCTGAGTTGGATTTTTCTGCTAATCAAGTGAGGCTGAACAAGTCACAAGCAGACAAGGAAATACAGCATAAAAACTCATCCTTGAATCGCTGTAAAGATAGGTTGATGGAAATGAGTAATAAAAATACCAAATGTTTACATGTATTGCAAAAGTCAGGAGCTGAAAAGATTTTTGAAGCTTATAAATGGGTCCAAGAACATCGCCATGTCTTCAATAAAGAGGTTTATGGTCCAGTGTTAATTGAGGTGAATGTCTCAGATCGGGGTCATGCTGCATATCTAGAGGGTCAAGTTGCTCATTACATTTGGAAGTCTTTCATAACACAAGATTCTGGTGATCGGGACCTCTTGGTGAAGCACCTAAAGTTCTTTGATGTTCCAGTTTTAAATTATACTGGGGGTGATGGTCACTGTAGGGAGCCTTTTGAAATTTCTGAAGATATGCGTGCTCTCGGCATCTACTCCCGGCTGGACCAAATTTTTGATGCTCCTTTTGCTGTCAAGGAGGTTTTGATTGGCCAGTTCAATTTGGATCATTCTTATATTGGATCCAAAGAAACTGATAAGAAGGCTGCTGAGGTCCCGGAATTGGGAATTATAGATTTATGGACACCTGAAAATCACTACCATTGGTCTAAGTCTAGATATGGAAGTCATATCTCGGCAGTTGTTGAACAAGTTGATCGGCCACACCTTATATTGGATAATTTGAATGTGGGAGAAATTGAGAGGCTGACTGCCCAGCTAATGGAGCTTGAAAGATCTATTGCTACGTTGGAAGAAAGTGTTAAAAGGTTTCGAGATGAGGAAAGAAGCTTTGTGAATCAAGCTGCTGATCTTCGTAAACAGTGGGAGGGCATTACTAATTCAGTGCGGAATGAGAAACAAAAGCGTCAAGCAATCAATAGCCGTATTGAGCAAAAGAAAGGGATACTAAAATCAATGGAGGAGCAGGATGATATGGATACTGAGATAGCAAAGCTTGTTGATCAGGCTAAAAAAGTCAACATTCAGAGGTTCCATAACGTTTTGAAAACGAAGGACCTTCTTGTTGAAGCTGTGGGTTACAGAAGAAATCTTATTGAACATCGTATGGCTTCAATTGAATTTGATGCTAAGATTGGAAAATTGGAGGCCAATCTGAAGCAGCATGAGAATCTTGCTCTGCAAGCATCGTTGCAATTCGAGAACTGTAAGAGGGAGGTTGAGAGTTGTGGAAACCAACTTAAAGATTCCTTGAAGCATGCTAAATCAATTGCACGTCTTACACCTGAGCTGGAGAAGGAATTTCTTGAGATGCCAACTACAATTGAGGAATTGGAAGAAGCTATCCAAGATACAACATCCCAAGCCAATTCAATCCTTTTGGTCAATCGTAACATATTGGAACAGTATGTAGATCGACAACGACAGATAGAAGATCTTGCAGCAAAACTTGAAGCAGACAAGGAAGAATGTAGTAGGTGTTCTACTGAAATAGAGAACATTAAGGGTAAATGGCTTCCAGCACTTAGAAACCTTGTGGCCCTCATAAATGAAACTTTCAGCCGTAACTTTCAAGAGATGGCTGTTGCTGGAGAAGTTTCACTAGATGAACAAGATAAGGAATTCAGTCAGTATGGAATTGTTATTAAAGTCAAATTCAGACAAACTGGAAAACTTGCACCTCTAAGTGCCCATCATCAATCTGGAGGGGAGCGATCAGTTTCAACTATAGTTTATCTTCTTTCCCTTCAAGATCTTACACACTGCCCATTCAGAGTTGTAGATGAAATCAACCAAGGGATGGACCCAATAAATGAAAGGAAGATGTTCCAGCAGCTCGTGAGATCTGCAAGCAAGCCAAATACACCACAGTGTTTCTTGCTTACCCCAAAGTTGTTACCAGATCTGCAATATAGTGAGGCATGCAGTATATTGAATGTAATGAATGGTCCTTGGATTGAGCAACCCTCAAAGGGTATTTCTCATACCAAAAAGCTTGTTATCTTCGTTTTAACTGCTATGGCTCACACTGCATGTTCTCTTCTGTTTTCTGTGATTCAGTCTGGTCTAACGGTGACCGATGGGGTATCATCACCGGACTCGTCGGAAAGACCCAGAGTTGAACACTAG 3252 0.4136 MAEWPPSKRPKIVRGDDDYMPGNILEIELSKFMTFDYLKCKPGPRLNLVVGPNGSGKSSLVCAIALGLCGEPQLLGRATSVGAYVKRGEESGYVKITLRGNNKEERIDITRNINTNNKSEWLLNGNVVAKSDVAQTIKRFNIQVNNLTQFLPQDRVCEFAKLSAIQLLEETEKAVGDPQLPEQHRALVDKSRALKHIELSVEKNEGTLNQLKERNAELEKDVERVRQRDEILAKAETMKKKLPWLQYDMKQAQYREAKERENDAAKVLEEAAKLLNDLKEPIKKQKEEKTALDAKCRKVESRIKENLTKRAEHLEKENQLDVDLRGKYKDMEEMRRQEETQQQRLIKTREELAAFELELESLGPFQPRTDELQRLKAEISELDFSANQVRLNKSQADKEIQHKNSSLNRCKDRLMEMSNKNTKCLHVLQKSGAEKIFEAYKWVQEHRHVFNKEVYGPVLIEVNVSDRGHAAYLEGQVAHYIWKSFITQDSGDRDLLVKHLKFFDVPVLNYTGGDGHCREPFEISEDMRALGIYSRLDQIFDAPFAVKEVLIGQFNLDHSYIGSKETDKKAAEVPELGIIDLWTPENHYHWSKSRYGSHISAVVEQVDRPHLILDNLNVGEIERLTAQLMELERSIATLEESVKRFRDEERSFVNQAADLRKQWEGITNSVRNEKQKRQAINSRIEQKKGILKSMEEQDDMDTEIAKLVDQAKKVNIQRFHNVLKTKDLLVEAVGYRRNLIEHRMASIEFDAKIGKLEANLKQHENLALQASLQFENCKREVESCGNQLKDSLKHAKSIARLTPELEKEFLEMPTTIEELEEAIQDTTSQANSILLVNRNILEQYVDRQRQIEDLAAKLEADKEECSRCSTEIENIKGKWLPALRNLVALINETFSRNFQEMAVAGEVSLDEQDKEFSQYGIVIKVKFRQTGKLAPLSAHHQSGGERSVSTIVYLLSLQDLTHCPFRVVDEINQGMDPINERKMFQQLVRSASKPNTPQCFLLTPKLLPDLQYSEACSILNVMNGPWIEQPSKGISHTKKLVIFVLTAMAHTACSLLFSVIQSGLTVTDGVSSPDSSERPRVEH* 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0409 1083 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 995 IPR027417 -
Dod10g0409 1083 Coils Coil 328 351 - -
Dod10g0409 1083 Coils Coil 677 697 - -
Dod10g0409 1083 Gene3D - 847 1024 IPR027417 -
Dod10g0409 1083 Coils Coil 194 228 - -
Dod10g0409 1083 Coils Coil 621 648 - -
Dod10g0409 1083 Coils Coil 841 864 - -
Dod10g0409 1083 Pfam RecF/RecN/SMC N terminal domain 24 993 IPR003395 -
Dod10g0409 1083 Gene3D - 23 232 IPR027417 -
Dod10g0409 1083 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 18 1035 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Dod10g0409 1083 CDD ABC_SMC5_euk 912 1027 - -
Dod10g0409 1083 CDD ABC_SMC5_euk 22 179 - -
Dod10g0409 1083 Coils Coil 251 317 - -
Dod10g0409 1083 Coils Coil 753 780 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0409 7 1032 Structural Maintenance of Chromosomes family AT5G15920 60.624 0.0 1243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0409 K22803 - gmx:100778678 1627.45