Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0403 ATGCCTTTGTGGTGGGAGGTTCCACAAGGTACTGTAGGCGAAAAGTTGCTTTACTGGCCAAGGGGAAGAAGGCATGCATCAAGTGTGTGGTTCTCAACAATTAACAGGGTTATTCTTGCTCCGCTAAATGAAAAAGCAGATAACAATTCTTACAACGTGGAGAAGATCAAAGACTGTATTGGATTCATAAAGTCAAGGCCTAAACCGCTAGCAACTTATGCCTTTACTAAAAACCAAACTCTGCAAATTAGAAGGATGGTATCTGAGACATCATCTGGAAGTCTCATATTCAACGATGCAATTCTACAATATATAGCGGACAACCTCCCATTTGGAGGAATTGGTGACAATGGATTTGGCATGTACCATGGCAAGTTTTCCTTTGACGTGTTCAGCCACCACAAGGCTGTGGCCAGAAAAAGTTACTACTCAGATTTTTGGTTCAAGTTTCCTCTGTGGACTCTTCAGAAGCTCCAACTACTTGAGGTGGCTTACAATTTGCACTTTCTTGGGGTTGTTTACAATGGTGGGGAGTTTGAAATTAGGGATGATGTTTATATGAAGAGGAGGGAAGATGCTAGCTCAGATGATGAAGAACCCGAAATGGGGGAGTATGGGGAGTGGTTTGATTCTGGGAGTCAAGTTATGATTGAGTGTGATGATTACTTGGGAGGGTTTCATTTGAAATGCTTGAAGCCACCGTTGAAGGAGTTTCCTGAAGGGGATTAG 729 0.4266 MPLWWEVPQGTVGEKLLYWPRGRRHASSVWFSTINRVILAPLNEKADNNSYNVEKIKDCIGFIKSRPKPLATYAFTKNQTLQIRRMVSETSSGSLIFNDAILQYIADNLPFGGIGDNGFGMYHGKFSFDVFSHHKAVARKSYYSDFWFKFPLWTLQKLQLLEVAYNLHFLGVVYNGGEFEIRDDVYMKRREDASSDDEEPEMGEYGEWFDSGSQVMIECDDYLGGFHLKCLKPPLKEFPEGD* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0403 242 PANTHER ALDEHYDE DEHYDROGENASE 52 173 IPR012394 GO:0006081
Dod10g0403 242 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 52 117 IPR016163 GO:0016620
Dod10g0403 242 SUPERFAMILY ALDH-like 53 151 IPR016161 GO:0016491
Dod10g0403 242 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 206 242 IPR013083 -
Dod10g0403 242 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 118 135 IPR016162 GO:0016491
Dod10g0403 242 PANTHER ALDEHYDE DEHYDROGENASE 52 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0403 Dod-Chr10 12569455 12585036 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0403 52 173 Aldehyde Dehydrogenase Gene Family AT4G36250 45.902 6.58e-33 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0403 K00128 - gmx:100819197 197.593