Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0376 ATGGCCAAGAAGAAGAGCTGGTTTAGCCTTGTGAAGAGACTGTTTTTATCGGACACACATTTCACACAACATAAGAAGGATAAAAGAAGGAAATGGATATTTGGGAGGCTAAAGACCAAGAGGTTGCTTTCGGTAAGAGCTCCACCACCCCCAAAAGAAACAAAACTCTGCGTGGCTGAAGAAGAACAAAGCAAGCATGCTTTGACAGTGGCAATTGCCTCAGCTGCTGCAGCTGAAGCTGCGATTACTGCTGCTCAGGCTGCCGTTGAGGTTGTTCTTCTCCAATCTGCTCATCAGAGTAATGAAAAGCAAAACGAAGTTCAACCTGTTAAAACTAGGCATGATGCTCCCCAATCCACATGCCAGTGCCAGTGGGAGGTTGAAGAATCTGCAGCTATAAAAATTCAAGCAGCATTCAGAGGCTACCTAGCAAGGAAAGCTCTGAAGGCATTGAAGGGAATAGTGAAGCTTCAAGCTATAATTCGTGGCACAGCTGTGAGACGCCAAGCAATGAGTACTCTGAAGTGCTTGCAGTCCGTTGTAAGCATCCAGTCAAAGATTTGTGCAAGGAGACTCCAAATGGTTGAAGGAACATTGGATTGTGATGAAAATGAAGAGATGCAAGGTTCAAGAGACAAGATAAAAAGGATGGTCTCGAACAGTGAAAAAAGATGGGATGACAGCATTTTATTGAAGGACGAGTTAGATGCATCTTGCATAAGCAAGAAAGAAGCTGTTCTTAAAAGAGAAAGAATAAAAGAGTACTCATTTAATCCTAGAAGGTCCGCAGAATCAGAAAGAAAACACGTGGGGGGAAGATGGAGGTACTGGATGGAGCAGTGGGTGGACACCCAACTTTCGAAGAGTAAAGAACTTGAAGATATAGACTCAGTTTTCAGCTCAGATTCAAGAGCTGGGGAGCAATATGGAAGAACACAACTTAAACTGAGAAATATGGAGAGACTAAATAAATTTGAAGGACTAGATTCTCCAACACTTGCTTCGAGGAAGTCTTTTCCAAATCAGAGGCAGGGTTCAGAGGGTGAAGATCACTCATTCCCAAGCACTCCAACGATTCCTACATACATGGCTGCAACAAAGTCAGCACAAGCAAAAGTAAGATCAACAGGCACACCAAAAATAAGGAGTGGAGGGAATTTGGACATGAACTCTGATAGCTATTCACCATGCAAGAAAAAGCTTTCTGTTGTAACTTCTACCAACGGCGAATTGCTCAGTAGTGGTAGGATGGGCAAGCTTAGTACGAACCAGCAAAGATCTCCCAGCGTAAAGGGCCTTTCAAGGCCTATATATAACATGAAGCCAGACATTGAAGGATCTCAGCATTGA 1350 0.4341 MAKKKSWFSLVKRLFLSDTHFTQHKKDKRRKWIFGRLKTKRLLSVRAPPPPKETKLCVAEEEQSKHALTVAIASAAAAEAAITAAQAAVEVVLLQSAHQSNEKQNEVQPVKTRHDAPQSTCQCQWEVEESAAIKIQAAFRGYLARKALKALKGIVKLQAIIRGTAVRRQAMSTLKCLQSVVSIQSKICARRLQMVEGTLDCDENEEMQGSRDKIKRMVSNSEKRWDDSILLKDELDASCISKKEAVLKRERIKEYSFNPRRSAESERKHVGGRWRYWMEQWVDTQLSKSKELEDIDSVFSSDSRAGEQYGRTQLKLRNMERLNKFEGLDSPTLASRKSFPNQRQGSEGEDHSFPSTPTIPTYMAATKSAQAKVRSTGTPKIRSGGNLDMNSDSYSPCKKKLSVVTSTNGELLSSGRMGKLSTNQQRSPSVKGLSRPIYNMKPDIEGSQH* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0376 449 Pfam IQ calmodulin-binding motif 130 149 IPR000048 GO:0005515
Dod10g0376 449 ProSiteProfiles IQ motif profile. 128 156 IPR000048 GO:0005515
Dod10g0376 449 MobiDBLite consensus disorder prediction 326 396 - -
Dod10g0376 449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 170 IPR027417 -
Dod10g0376 449 ProSiteProfiles IQ motif profile. 152 179 IPR000048 GO:0005515
Dod10g0376 449 MobiDBLite consensus disorder prediction 334 396 - -
Dod10g0376 449 SMART iq_5 127 149 IPR000048 GO:0005515
Dod10g0376 449 SMART iq_5 150 171 IPR000048 GO:0005515
Dod10g0376 449 Gene3D - 128 178 - -
Dod10g0376 449 PANTHER IQ-DOMAIN 11 5 437 - -
Dod10g0376 449 Pfam Protein of unknown function (DUF4005) 347 429 IPR025064 -
Dod10g0376 449 MobiDBLite consensus disorder prediction 408 432 - -
Dod10g0376 449 PANTHER IQ-DOMAIN 5-RELATED 5 437 - -
Dod10g0376 449 MobiDBLite consensus disorder prediction 408 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0376 Dod-Chr10 10892213 10895338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0376 1 442 IQD Protein Family AT5G13460 42.163 2.26e-94 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0376 - - gmx:100800192 598.201