Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0360 ATGGATAGGATTCTTGAAAAGACAGATGAAAATAGTAAATCGCTGCGTTCGTCTTCTTCTGTTGTTGCTCTAGCAATCAAGGGTAATAAGAAGAGCAAATACGTGGTACAGTGGGCACTTAATAAGTTTGTTCCTGAGGGAATGATTGTCTTCAAGCTGATACATGTCCATGCGGGTATAAAAGGAGTTCCAACACCAATGGGAAATGTGATTCCTCTTTCACAAGTGCGTACTGATGTAGCAAATGCTTTCAAAAAGGAAGTGGAGTGGCAGACAGATCAAATGCTTCTACCTTTTAAGAAAATGTGTGAGCAGAGAAAGGTGCATGTAGATGTTGTGGTGATTGAATCAGATGATGTGGCAACTGCAGTAGCAGAGGAAGTAGCTAAGGGTGCTATAACCAAACTCGTTGTTGGAGCTTCATCTCGTGGCATATTTACAAGTAAACATAAGGGCATGTCCGCGAAAATCTCAGTTTGCACTCCAAGATTTTGTACAGTTTATGCTATTTCAAAAGGAAAATTGTCCATACGACCATCAGACATACAGGTTGATGGTAGCATTATAGATGACACTAGTGAAACCAGTTTTTCCTCCAGCAGCTCATCTAATTACACTTCCGCCTCTCAGACAGACTCTGCCTCAGTTGCGTCATATGCTCCTCTACATTCCTCTTCCTTAGCAACACAGCGGTTTCAAGCTCTGTCAAGTATAAACCAGACCTTACTAAGGACAAGTCCTAGTTTAACTGAAAATAACCATTCTAGAGGCCAATCTCTGGATATTGGGAGAGAGAATACTGCTACAAGTTCTGTCAGAAACTCTGATATTGATTATGCTTTGGATCGGGCCTCTAGTTTCAAAAGCATTAAATCAGATGCTGAATCTTGGAATTATGATGATCAAAATTCTGCCAATGATGAGCCATTAGCAACCGAACTTCCTTCACCTAATAGGCAGGAAAATGTTAACCTTGAGCTGGAAAAGTTGAGAATTCAGCTAAGACATGCTCAAGGAATGCATGCTGTAGCTCAAAGTGAGAACATAGATGCATCACGAAAGCTGAATGACCTAAGCAAGCGGCGATCAGAAGAATCCTTTAAACTGAAGGGGATTATTGCAATGGAGGAGGAGGCCAAAGAATTGGCAAGACAAGAAAGAGAAAAATATCGAGCCGCAGCAAGAGAAGCTGCATATTTGAAAGAATGTGCTGAAAGAGAAGCTGCAGAAAGAAAAGACGCAGAGTTGAAAGCTATTCGTGCTGCCAAAGAGAAAGAAAAGCTGGAGGATGCTCTTAGTGGTTCCATGCCCATGTACCGAAAGTTTACATGGGATGAAATTGTGTCTGCTACTTCATCTTTTTCTGAAGATTTAAAAATTGGAATGGGAGCCTATGGAATGGTGTACAAGTGCAGTTTGTATCATACAACTGTTGCTGTTAAGGTTCTCCATTCTGGTCGGGGCCACAAAAGTAAGCAATTCCAGCAGGAGCTAGAGATATTGAGCAGAATTCGTCATCCAAACTTGCTTCTTCTTCTTGGTGCATGTCCTGATCATGGGTGCCTTGTGTATGAATATATGGAGAATGGTAACTTGGAGGATAGATTACTCCGAAGAAACAGTACTGCCCCAATTCCCTGGTTTGAGAGGTATCGTATAGCATGTGAAGTTGCGTCAGCTCTTGCCTTTCTTCACAACTCAAAGCCAAAGCCTATCATCCATCGTGATTTGAAACCCGCAAACATCTTGCTTGGTCGTAACCTTGTCAGCAAGATTGGTGATATTGGCCTTTCTACAATGCTTCATTCAGATAATTTGTCTACCATGTATAAGGACACTGAGCCTGTCGGGACACTCTGCTACATAGATCCTGAGTATCAAAGGAATGGAGTAATATCTGCAAAATCAGATGTCTATGCATTGGGAATAGTGATCTTACAGTTATTGACTGCGAAACCAGCAATAGCAATTACTCATGTGGTTGAAACAGCAATTGATGGTGGCAATTTGACAGATATATTGGATCCAGAGGCAGGAATTTGGCCATTTCAAGAGACATTGGACTTAGCTCGGTTAGGACTGAGCTGTGCCGAACTTCGCCGTAGAGACAGGCCTGATTTAAATGATCACGTGCTTCCAAGACTAGAGAGATTGAAAGAAGTTGCTGACAAGGCCCAAAAATATGCTTCATTAGTAACTATTAAATCCAAACCTCCCAATCACTTTATCTGTCCTATACTTCAGGATGTGATGGATGATCCTTGTGTTGCTGCGGATGGATATACATATGATCGCAAAGCAATTGAAAAGTGGTTTCAGGAGAACGACAAATCACCAATGACAAATATGGCTTTACCTCATAAGGATCTAATTCCTAATTACACGCTTCTGTCCGCAATTATGGAGTGGAAATCTCGATAA 2421 0.4147 MDRILEKTDENSKSLRSSSSVVALAIKGNKKSKYVVQWALNKFVPEGMIVFKLIHVHAGIKGVPTPMGNVIPLSQVRTDVANAFKKEVEWQTDQMLLPFKKMCEQRKVHVDVVVIESDDVATAVAEEVAKGAITKLVVGASSRGIFTSKHKGMSAKISVCTPRFCTVYAISKGKLSIRPSDIQVDGSIIDDTSETSFSSSSSSNYTSASQTDSASVASYAPLHSSSLATQRFQALSSINQTLLRTSPSLTENNHSRGQSLDIGRENTATSSVRNSDIDYALDRASSFKSIKSDAESWNYDDQNSANDEPLATELPSPNRQENVNLELEKLRIQLRHAQGMHAVAQSENIDASRKLNDLSKRRSEESFKLKGIIAMEEEAKELARQEREKYRAAAREAAYLKECAEREAAERKDAELKAIRAAKEKEKLEDALSGSMPMYRKFTWDEIVSATSSFSEDLKIGMGAYGMVYKCSLYHTTVAVKVLHSGRGHKSKQFQQELEILSRIRHPNLLLLLGACPDHGCLVYEYMENGNLEDRLLRRNSTAPIPWFERYRIACEVASALAFLHNSKPKPIIHRDLKPANILLGRNLVSKIGDIGLSTMLHSDNLSTMYKDTEPVGTLCYIDPEYQRNGVISAKSDVYALGIVILQLLTAKPAIAITHVVETAIDGGNLTDILDPEAGIWPFQETLDLARLGLSCAELRRRDRPDLNDHVLPRLERLKEVADKAQKYASLVTIKSKPPNHFICPILQDVMDDPCVAADGYTYDRKAIEKWFQENDKSPMTNMALPHKDLIPNYTLLSAIMEWKSR* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0360 806 Gene3D HUPs 10 151 IPR014729 -
Dod10g0360 806 SMART serkin_6 454 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0360 806 Coils Coil 373 396 - -
Dod10g0360 806 MobiDBLite consensus disorder prediction 246 268 - -
Dod10g0360 806 PANTHER OS02G0152300 PROTEIN 17 804 - -
Dod10g0360 806 Pfam Protein kinase domain 456 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0360 806 Coils Coil 406 431 - -
Dod10g0360 806 SUPERFAMILY Protein kinase-like (PK-like) 436 709 IPR011009 -
Dod10g0360 806 Pfam U-box domain 739 804 IPR003613 GO:0004842|GO:0016567
Dod10g0360 806 ProSiteProfiles U-box domain profile. 737 806 IPR003613 GO:0004842|GO:0016567
Dod10g0360 806 ProSitePatterns Serine/Threonine protein kinases active-site signature. 572 584 IPR008271 GO:0004672|GO:0006468
Dod10g0360 806 ProSitePatterns Protein kinases ATP-binding region signature. 460 481 IPR017441 GO:0005524
Dod10g0360 806 MobiDBLite consensus disorder prediction 298 320 - -
Dod10g0360 806 CDD STK_N 21 173 - -
Dod10g0360 806 SUPERFAMILY RING/U-box 736 805 - -
Dod10g0360 806 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 24 148 - -
Dod10g0360 806 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 737 806 IPR013083 -
Dod10g0360 806 SMART Ubox_2 741 803 IPR003613 GO:0004842|GO:0016567
Dod10g0360 806 Gene3D Transferase(Phosphotransferase) domain 1 527 736 - -
Dod10g0360 806 CDD RING-Ubox_WDSUB1_like 742 782 - -
Dod10g0360 806 ProSiteProfiles Protein kinase domain profile. 454 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0360 806 Gene3D Phosphorylase Kinase; domain 1 423 526 - -
Dod10g0360 806 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 35 17 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0360 Dod-Chr10 9904263 9914900 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0360 19 805 U-box Gene Family AT4G25160 52.791 0.0 828
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Dod10g0360 Pkinase 1.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0360 - - gsj:114409387 1249.19