Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0316 ATGTTTCCGGAGAACAATAGTAACGGCTACCAGCAGCAGCAGCCACTGGGAATAAAGGGGCACAGTCACAGAGAGCGAGCCCGGCATGGCACGCGCAGGTCACGTGCTTCCAGAGACAGCCTCAGCCTTAGGGTTACTGACGAACAACAACAGCAGCAGCAGCAGCGACCTCCTTGCACGGACTTCGACATGGCCTATTTCCATTCCTACGCTCACCTCGGCATCCACCAAGAGATGATCAAGGATCGCGTGAGGACTGAAACTTATAGGGAGGCAATCATGCGGCATCAGAGTTTTATTGCAGGCAAAGTTGTAGTTGATGTTGGTTGTGGTACAGGAATCCTTTCTATATTTTGTGCTCAGGCTGGTGCAAAGCGGGTTTATGCAGTTGATGCCAGTGACATTGCTCTGCAGGCAAATGAAGTCGTGAAAGCAAATAACCTGTCTGGTGTTGTTGTTGTATTGCATGGACGGGTTGAGGATGTTGAAATTGATGAAAAGGTGGATGTTATAATTTCAGAATGGATGGGTTATATGCTTTTATATGAGAGCATGCTTGGAAGCGTTATTACTGCCAGAGATCGCTGGCTCAAACCTGGGGGTCTTATTCTTCCTTCAAGTGCAACGTTGTACATGGCTCCTGTCACACATACTGACAGATACAGTGAAAGCATCGACTTCTGGCGCAACGTTTACGGAATTGATATGTCTGCGATGTTATCATTAGCAAAACAGTGTGCATTTGAAGAACCTTCCGTGGAAACAATTACTGGTGAAAATATTTTGACATGGCCACATGTGGTAAAATATATTGATTGTTATTCTGTTTCCATCCGTGAGCTAGAAACTGTAACAACAAGGTTTAAGTTCAATTCAATGATGCGAGCACCACTACATGGTTTTGCATTTTGGTTTGATGTTGAATTCAATGGGCCTGCGATAGCACCAACCAATTATCATTCATCAACTTCATTTACTGACAATCATCTGGTGAATGGTAGTCAGAGAAAAAAGCGGACAAGTCCAAACGAAGCATTGGTGCTGTCCACCGCCCCTGAGGACCCTCCCACACATTGGCAGCAGACATTGATATACTTTTATGATCCGATAGAGCTAGAACAAGATCAAGTAATTGAAGGTTTAGTGACATTGACACAAAGCAAAGAGAATGCTCGATTTATGAACATTCACCTTGAGTATACCTCGGGAGGTGGATCGTATGTTAAAGAGTCTGTTATGAGATGA 1245 0.445 MFPENNSNGYQQQQPLGIKGHSHRERARHGTRRSRASRDSLSLRVTDEQQQQQQQRPPCTDFDMAYFHSYAHLGIHQEMIKDRVRTETYREAIMRHQSFIAGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASDIALQANEVVKANNLSGVVVVLHGRVEDVEIDEKVDVIISEWMGYMLLYESMLGSVITARDRWLKPGGLILPSSATLYMAPVTHTDRYSESIDFWRNVYGIDMSAMLSLAKQCAFEEPSVETITGENILTWPHVVKYIDCYSVSIRELETVTTRFKFNSMMRAPLHGFAFWFDVEFNGPAIAPTNYHSSTSFTDNHLVNGSQRKKRTSPNEALVLSTAPEDPPTHWQQTLIYFYDPIELEQDQVIEGLVTLTQSKENARFMNIHLEYTSGGGSYVKESVMR* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0316 414 Gene3D Vaccinia Virus protein VP39 60 205 IPR029063 -
Dod10g0316 414 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 63 397 IPR025799 GO:0016274|GO:0018216
Dod10g0316 414 Gene3D - 207 412 - -
Dod10g0316 414 MobiDBLite consensus disorder prediction 1 18 - -
Dod10g0316 414 Pfam Ribosomal protein L11 methyltransferase (PrmA) 101 175 - -
Dod10g0316 414 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 42 411 IPR025799 GO:0016274|GO:0018216
Dod10g0316 414 MobiDBLite consensus disorder prediction 1 58 - -
Dod10g0316 414 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 69 403 IPR029063 -
Dod10g0316 414 MobiDBLite consensus disorder prediction 43 58 - -
Dod10g0316 414 CDD AdoMet_MTases 105 204 - -
Dod10g0316 414 PANTHER BNAC03G41340D PROTEIN 42 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0316 Dod-Chr10 8109431 8121579 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0316 66 380 C2H2 Transcription Factor Family AT3G12270 38.788 1.35e-67 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0316 K11437 - gmx:100809171 704.131