Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0313 ATGCCAATCGCGAACGTGATAAGGATCATGCGAAGGATCCTCCCCTCGCACGCCAAGATCTCCGACGACGCAAAGGAGACGATCCAAGAGTGCGTGTCTGAGTACATCAGCTTCATCACCGCCGAAGCCAACGACCGCTGCCAGCGCGAGCAGAGGAAGACCGTCACAGCCGAGGACGTCCTCTGGGCAATGGGGAAGCTCGGCTTCGACGACTACGTCGGCCCTCTCTCCCTCTACCTCCACCGCTACCGCCAGACCGAGGGCGAACCCGCCGCCGTGAGGCGCACCATTGCCGCCCCGCCCCCCTCTGCAGCCAATTATGGGGTGCATGCTCTGCCGCTGCCGCCACCGCCGCCAATGCAGCCACCGGCGCCTGATTCGGGTTACGGATCAGGATTTCCAGGTGGTGGAGGAGTGTTTAACCCATCAGCAAATGCTTCTGGTATGACGGGAGGGTTCTACAGGGATGATGGTTCTGCTGGCTTTGATCCTTTTGCTCCTCACATCAAACGTGATCGCCTCTGA 525 0.6057 MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITAEANDRCQREQRKTVTAEDVLWAMGKLGFDDYVGPLSLYLHRYRQTEGEPAAVRRTIAAPPPSAANYGVHALPLPPPPPMQPPAPDSGYGSGFPGGGGVFNPSANASGMTGGFYRDDGSAGFDPFAPHIKRDRL* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0313 174 MobiDBLite consensus disorder prediction 114 136 - -
Dod10g0313 174 Gene3D Histone, subunit A 1 100 IPR009072 GO:0046982
Dod10g0313 174 SUPERFAMILY Histone-fold 1 90 IPR009072 GO:0046982
Dod10g0313 174 PRINTS CCAAT-binding transcription factor subunit A signature 47 65 - -
Dod10g0313 174 PRINTS CCAAT-binding transcription factor subunit A signature 28 46 - -
Dod10g0313 174 PRINTS CCAAT-binding transcription factor subunit A signature 66 84 - -
Dod10g0313 174 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 102 IPR027113 GO:0001228|GO:0006355|GO:0016602
Dod10g0313 174 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 1 64 IPR003958 -
Dod10g0313 174 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 1 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0313 Dod-Chr10 8084191 8084715 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0313 1 89 CCAAT-HAP3 Transcription Factor Family AT5G47670 87.640 1.20e-55 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Dod10g0313 CBFD_NFYB_HMF 1.1e-24 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0313 K08065 - gmx:100811633 196.052