Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0300 ATGCTTCAAAGAAGTTCATCATTTCAGAAGCTTCAGTCTTGGTTTCAACTTCTGAATGGGAATTGGGAGCTGGCAAAGATAATAAAAACTTCTGGAGCTGAGTCTGTTATTACTCTGCCTGATGGGAAGGTTTTGAAGGTGAAAGAAGAAAGTTTGGTACCAGCAAATCCTGATATTCTTGATGGAGTTGATGACCTCATGCAACTTAGTTATTTAAACGAACCCTCTGTTTTATACAATCTGCAATACAGATACAGTCAAAATATGATTTATACAAAAGCAGGGCCTATTTTGGTTGCCATAAATCCCTTTAAGAAAGTTCCTCTGTATGATAATGATTATATTCAAGCCTACAAGCATAAAGCAATTGAAAGCCCTCATGTATATGCAATTGCAGATACAGCCATCCGAGAAATGATACGAGATGAAGTTAATCAATCCATTATTATAAGTGGGGAGAGCGGAGCAGGGAAGACAGAGACAGCGAAGATAGCAATGCAGTACTTGGCTGCCCTTGGTGGTGGAAGTGGAATAGAATATGAGATATTAAAGACTAATCCAATACTAGAATCCTTTGGTAATGCAAAAACACTGAGAAATGACAACTCAAGTCGTTTTGGAAAGCTCATTGAGATCCACTTCAGCGAAACTGGGAAAATTTCTGGTGCTAATATTCAAACATTTTTACTGGAAAAGTCTAGAGTAGTCCAATGCAATGAAGGGGAAAGGTCATATCATATATTTTATCAGCTATGTGCTGGTGCACCACCATCTCTCAGGGCGAAGCTTAATCTACAAAATGCGGAAGACTATAAGTATCTGAGGCAGAGCAATTGCTATTCAATTACTGGTGTTAATGACGCAGAAGAATTGCGCATAGTAATGGAAGCTCTTGATGTTGTCCACATTACTAAAGAAGACCAGGAGAATGTATTTGCAATGCTCGCTGCAGTATTATGGTTAGGAAATGTATCATTTACTGTGATTGATAATGAAAATCATGTTCAAGCTGTAGAAGATGGGGGTCTGTTCAACGTTGCTAAATTGATTGGCTGTGACATTGAAGATCTCAAGTTGACTCTATCAACACGTAAAATGAAAGTTGGTAGTGATAACATTGTCCAAAAGTTGACATTGTCACAGGCTATTGATGCAAGAGATGCTTTGGCAAAGTCAATATATGCATGCCTGTTTGATTGGTTGGTTGAACAAATAAATCAATCACTTGCTGTTGGCAAAAGATGTACTGGCAGATCAATCAGTATTCTCGATATCTATGGCTTTGAATCATTCAATAGGAACAGCTTTGAGCAGTTTTGCATAAATTATGCTAATGAAAGATTACAGCAACACTTCAATCGTCATTTATTTAAGTTAGAACAGGAGGAATATATACAAGATGGGATTGACTGGGCTAAAGTTGACTTTGAAGACAACCAAGACTGCCTTAATCTGTTTGAGAAGAGACCACTGGGGTTATTATCCCTGTTAGATGAAGAGTCCACTTTCCCAAATGGCACGGATTTAACATTTGCTGACAAGCTTAAGCAGCATTTGAATTCTAATTCATGTTTCAAAGGAGAAAGAGACCAAGCCTTTACTGTGTGTCATTATGCTGGGGAGGTCACGTATGATACAACTGGGTTTCTGGAGAAGAACAGGGACCTATTGCACTTGGATTCCATCAACCTTTTATCCTCGTGCACATGTCATCTTCCTCAAATATTTGCAGCTCATATGCTTACTCAGTCTGAGAAACCAGTAGTTGGTCCCTTGCACAAGTCAGGTGGGGCAGATTCCCAAAAGTTAAGTGTTGCTACGAAGTTCAAGGGGCAATTGTTCCAACTGATGCAACGTTTAGAGAGCACTACACCACATTTTATTCGCTGCATTAAGCCCAATAATCTACAAGCTCCCGAATCATATGAGCAAGGCCTGGTACTGCAGCAGCTGAGATGCTGTGGGGTCCTAGAAGTGGTTCGGATATCAAGATCAGGCTTTCCCACAAGAATGTCTCACCAAAAGTTTGCCAGAAGATATGGCTTTCTTCTCCTTGAGAATGTTGCGTCCCGGGATCCACTTAGTGTTTCAGTTGCAATTCTTCATCAGTTTGGTATTTTGCCTGAGATGTATCAAGTGGGCTACACAAAATTATTTTTCCGAACAGGGCAGATTGGCATGCTTGAAGATACTAGAAATCGTACCCTCCATGGCATTTTACGTGTCCAAAGCTGCTTCAGGGGTTATAAAGCTCGTTGTTCCCTCATGGAGATTCGAGGAGGAATCACTACTCTGCAGTCATTTATTAGGGGAGAACAAACCAGAAAAGCATATGCAGCTGTACTTCGGAGGCATAGAGCTGCTGTTATTATACAGAAGAGCATGAAAGCAGTATTTGCAAGAAACAGAATGAGAACTGTTAATGATGCTGCAATTGTCATACAATCAGTTATTCGTGGTTGGTTGGTTAGATGCTCAGGAGATGTAGGATTTCTGAAATCCGGCGGCAAGAAGACAGAAGAGTCCGATGAGGTTCTGGTGAAGTCATCTTTCTTGACTGAATTACAGTGCCGAGTACTTAAGGCTGAAGCTGCTCTGAGAGAGAAAGAAGAGGAAAATGACATCCTTCACCAACGTCTGCTACAGTATGAGAGCCGATGGTCTGAGTATGAATTGAAGATGACGTCCATGGAAGAAGTGTGGCAGAAACAAATGAGATCCCTGCAATCTAGCCTCTCCATTGCTAAGAAGAGCCTTGCTATTGATGATTCCAAAAGAAATTCAGATGCATCTGTTAATGCAAGTGATGAGCGGGATTATAGTGGCGACGTAGGAAGTAATCACAAGCGCCATGAAAGCAATGGGACGAGATCAACGGGTGCTGGTTTGAGTGTTATTAGTCGCCTGGCTGAAGAGTTTGAGCAGAAAAGTCGAGTGTTTGGCGATGATGCCAAGTTCCTTGTTGAGGTAAAATCTGGTCAAGCAGAGGCAAGTTTGAACCCAGATCAAGAGCTTAGAAGGTTAAAACAGATGTTTGAAGCTTGGAAAAAGGATTATGGGGCAAGACTCCGCGAAACAAAGGTTATTCTGAATAAACTTGGAAGTGAAGAAGGTGGTGCACTTGAGAAAGTGAGGAAGAAGTGGTGGGGAAGAAGGAACAGTACAAGGATAAATTGA 3177 0.4095 MLQRSSSFQKLQSWFQLLNGNWELAKIIKTSGAESVITLPDGKVLKVKEESLVPANPDILDGVDDLMQLSYLNEPSVLYNLQYRYSQNMIYTKAGPILVAINPFKKVPLYDNDYIQAYKHKAIESPHVYAIADTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILESFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCNEGERSYHIFYQLCAGAPPSLRAKLNLQNAEDYKYLRQSNCYSITGVNDAEELRIVMEALDVVHITKEDQENVFAMLAAVLWLGNVSFTVIDNENHVQAVEDGGLFNVAKLIGCDIEDLKLTLSTRKMKVGSDNIVQKLTLSQAIDARDALAKSIYACLFDWLVEQINQSLAVGKRCTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDNQDCLNLFEKRPLGLLSLLDEESTFPNGTDLTFADKLKQHLNSNSCFKGERDQAFTVCHYAGEVTYDTTGFLEKNRDLLHLDSINLLSSCTCHLPQIFAAHMLTQSEKPVVGPLHKSGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNLQAPESYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLENVASRDPLSVSVAILHQFGILPEMYQVGYTKLFFRTGQIGMLEDTRNRTLHGILRVQSCFRGYKARCSLMEIRGGITTLQSFIRGEQTRKAYAAVLRRHRAAVIIQKSMKAVFARNRMRTVNDAAIVIQSVIRGWLVRCSGDVGFLKSGGKKTEESDEVLVKSSFLTELQCRVLKAEAALREKEEENDILHQRLLQYESRWSEYELKMTSMEEVWQKQMRSLQSSLSIAKKSLAIDDSKRNSDASVNASDERDYSGDVGSNHKRHESNGTRSTGAGLSVISRLAEEFEQKSRVFGDDAKFLVEVKSGQAEASLNPDQELRRLKQMFEAWKKDYGARLRETKVILNKLGSEEGGALEKVRKKWWGRRNSTRIN* 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0300 1058 Coils Coil 852 886 - -
Dod10g0300 1058 ProSiteProfiles IQ motif profile. 737 764 IPR000048 GO:0005515
Dod10g0300 1058 Gene3D Kinesin motor domain 60 666 IPR036961 -
Dod10g0300 1058 CDD MYSc_Myo8 75 721 IPR036022 -
Dod10g0300 1058 ProSiteProfiles IQ motif profile. 808 836 IPR000048 GO:0005515
Dod10g0300 1058 Gene3D Myosin VI head, motor domain, U50 subdomain 300 408 - -
Dod10g0300 1058 ProSiteProfiles Myosin motor domain profile. 61 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod10g0300 1058 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Dod10g0300 1058 PANTHER MYOSIN 21 1058 - -
Dod10g0300 1058 Pfam IQ calmodulin-binding motif 739 753 IPR000048 GO:0005515
Dod10g0300 1058 Pfam IQ calmodulin-binding motif 762 778 IPR000048 GO:0005515
Dod10g0300 1058 Pfam IQ calmodulin-binding motif 809 825 IPR000048 GO:0005515
Dod10g0300 1058 Gene3D - 243 299 - -
Dod10g0300 1058 MobiDBLite consensus disorder prediction 925 960 - -
Dod10g0300 1058 Gene3D - 431 623 - -
Dod10g0300 1058 SMART MYSc_2a 55 734 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod10g0300 1058 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Dod10g0300 1058 Gene3D - 667 731 - -
Dod10g0300 1058 PRINTS Myosin heavy chain signature 187 214 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod10g0300 1058 PRINTS Myosin heavy chain signature 145 170 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod10g0300 1058 PRINTS Myosin heavy chain signature 91 110 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod10g0300 1058 PRINTS Myosin heavy chain signature 472 500 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod10g0300 1058 PRINTS Myosin heavy chain signature 419 447 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod10g0300 1058 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 779 IPR027417 -
Dod10g0300 1058 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 21 1058 - -
Dod10g0300 1058 Pfam Myosin head (motor domain) 63 721 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod10g0300 1058 SMART iq_5 783 805 IPR000048 GO:0005515
Dod10g0300 1058 SMART iq_5 806 828 IPR000048 GO:0005515
Dod10g0300 1058 SMART iq_5 734 756 IPR000048 GO:0005515
Dod10g0300 1058 SMART iq_5 757 779 IPR000048 GO:0005515
Dod10g0300 1058 MobiDBLite consensus disorder prediction 941 955 - -
Dod10g0300 1058 Gene3D - 737 785 - -
Dod10g0300 1058 Gene3D - 786 829 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0300 Dod-Chr10 7897273 7914477 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0300 11 1056 Myosins gene family AT1G50360 79.198 0.0 1731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0300 - - gmx:100796845 1906.72