Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0277 ATGATTGTTACTTTGAATGCACAGGCTGCTCAACTCAATTTTGTAGTTGGATCTCATGTTTGGATTGAGGACCATGATGAGGCTTGGATTGATGGAGAAATCCTAGAATCTAGTGGTGCAGAGATCAGGGTTAGTTGTGCATCAGGGACCAAGGTTGTGAGTAAATCAGCTCATGTATATCCCAAAGATCCTGAATTCCCACCTCATGGTGTGGAAGATATGACAAGGCTGGCATATCTGCATGAACCAGGGGTACTTCAAAATTTGCAAATTCGATATGAGATAAATGACATATATACATACACAGGAAATATATTGATAGCCGTGAACCCTTTTCAAAGGTTACCTCATTTGTATGCCAATGAAACAATGGAGCAGTATAACGGTGCACCTTTGGGTGAGAAGAGCCCACATCCATTTGCCATTGCAGATTCTGCATATAGGAAGATGATAAATGAAGAAACAAGCCAATCTATTTTGGTGAGTGGAGAAAGTGGAGCTGGTAAAACAGAAAGTACAAAGATGCTTATGTGTTATCTTGCCTATATGGGAGGAAGAGCAGCAAATGAGGGACGGTCAGTAGAGCAACAAGTTCTAGAGTCCAATCCTGTTTTAGAAGCATTTGGCAATGCCAAGACTGTTAGAAACAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATTCAGTTTGATCAAAAGGGGAGAATTTCAGGAGCTGCTATCAGAACTTATTTGCTGGAACGATCCCGTGTCTGTCAAGTTTCTGATCCTGAGAGAAATTATCATTGCTTTTATATGCTTTGTGCTGCACCACAAGAGGATATTGAAAGGTACAAATTGGGAAATCCAAGCACTTTTCATTACCTAAATCAATCCAACTGCATTGAGCTGGATGGGCTGGATGATTCTAAGGAATACCGTGCAACTAGGAGAGCTATGGATATCGTTGGGATCAGCTCTAATGAGCAGGATGCTATATTTCGAATAGTAGCAGCAGTACTACATTTAGGAAACATTGAATTTGTTAAGGGTGAGGATGAAGAGACAGATTCCTCGCAACCCAAGGATGACAAATCCTTTTTCCACCTGGAAACAGCAGCTGATCTTTTGATGTGTGATGATAAGGCCCTTGAAGACTCTTTCTGCAAGCGTGTTATGGTGACTCGTGGCGAGGCCATAACAAAATCGCTTGATCCAACTGCTGCAGCTCTCAGTAGAGATGCTTTGGCTAAAATAGTTTATTCAAGGCTTTTTGACTGGATTGTGGACAAGATAAACAACTCTATTGGACAAGACCCGAATTCAAAGAACTTGATTGGAGTTCTAGATATTTATGGATTTGAGAGTTTCAAGACAAACAGCTTTGAGCAATTTTGTATCAATTTGACAAATGAAAAATTGCAGCAACATTTCAACCAGCATGTCTTCAAAATGGAGCAAGAAGAATATACAAAGGAAGAAATTGATTGGAGTTATATAGAGTTTGTGGATAATCAAGATGTTCTTGATCTCATAGAGAAAAAACCTGGCGGCATTATTGCTCTTCTGGATGAGGCCTGTATGTTTCCAAGATCAACATATGAAACATTTGCTGAAAAGCTATATCAAACTTTTAATCATAATAAACGCTTTAGCAAGCCAAAGTTTTCTCGTACCGACTTCACAATTAACCACTATGCTGGTGATGTCACTTATCAAACTGAGTTATTCCTTGATAAAAATAAAGACTATGTTGTTCCAGAGCACGCAGCCCTACTCAGTGCTTCAAAGTGCCCTTTTGTTTCAGGGTTATTCCCGCCTTTACCTGAGGAAACTACGAAATCAACAAAGTTCTCTTCCGTAGCCACTCAGTTTAAGCATCAACTTCAAGCTTTGCTTGAAACACTAAATGCTACTGAGCCACACTACATTCGTTGCGTAAAGCCAAATAATCTTCTTAAGCCGGGGATATTTGAGAATGCTAATGTGTTGCAACAGCTCCGATGTGGGGGAGTGATGGAGGCAATACGGATAAGTTGTGCCGGATATCCCACTAGAAAGAACTTTGATGAATTTGTTCAGCGGTTTAGTATCCTGGAACCTAAGGTTCTGAAAACATGCCCTGATGAGATGACTGCTTGCAAGATGCTTCTAGACAACGTAAACCTTACAGATTATCAGATTGGAAAGACAAAAGTGTTTCTAAGAGTAGGTCAAATGGCAGAACTTGATGCATGTCGGGCAGAGGTCTTAGGAAGATCTGCAACTATTATCCAAAGAAAAGTTTGCACATTTCTTTGTCAGAAACACTACAATTTATTGCGATTGTCTGCCATAGAACTACAAGGGGTCGCCAGAGGACAACTTGCACGCCATCTGTATGAAAACATGAGGAGGGAAGATGCTTCTTTGAAAATCCAAAAGAACTTCCGCATGTATCTTTCCAATAATGCTTACAAAACCGTTCATGCTTCAGCTATTTATATTCAAACTGCTATGAGAGGGATGACTGCTAGAAATGACCTTAAATTCAGGAGTAAAACAAAAGCTGCAGTTGTTATCCAGAGCCATGGCAGAGGCTATATAGTTCACACTCATTTCCAAAGGCAAAAGAGAGCAGCAATAGCTGCACAGTGTTCCTGGAGGAGAACATTGGCACGCAGAGAACTTCGAAAGCTTAAAATGGCTGCTAGGGAAGCCAAGGCTCTTGAAGCTGCCAAAAAAGATCTGGAAAAGCAAGTCGAAGAACTAACTTTGTCTCTACAAACAGAGAAGAGAATGAGGGAAGCCAAGACACAGGAAAATGAAAAATTACAATCTGCATTGCAAGAGATGGAGCTTCAGTTCAGAGAAACTGAGGCAATACTGATGAAGGAACGGGAGGCTGCTAAAAAAGCAGCTGGGCAAACTTCAACTATACAGGAGCTTCACATTAATGCAAGTGGTAGTGAATTGATCTGTAAGCTTACTGCAGAAAATGAACAACTCAAGGAGCTGGTTCATTCATTGGAAAGGAAAAATATACAGGACCTTCCTCTTAACTTTACTGAGAATGAACTGATTAATAAGCTTACTTCAGAAAAGCAACATCTCGAGGATGAGGTTAATTCATTGGAAAAGAAAATTGATGAAACAGAGAGGAAATATGAAGAAAGTAACAGGCTTAGTGAAGAGCGCATGAATCAAATTATAGAAACAGAAAGCAAGATGATTGAGCTAAAGAAATCAAAACAAAGGCTTGAAGAAAAACTCTCTGATATGGAAACTGAGAATCAAGTCTTAAGGCAGCAAGCCCTATTGAGTTCATCATCAAGGAGAATGTCCGGAAAATTTTCACCTTCTCCTGCTCCGCTTCTGGAGAATGATCATCAGGCATCAGCAGGTTCCACCGCAGCAAAAACATTTGGTACTGATGCTGACAGTAAACTGAGGAGATCTCAAATGGAGAGGCATCAAGAGAGTGTAGATACTCTTTTCAAATGTGTGCAGAAAGATCTTGGGTTCTCTGAAGGAAAACCTGTTGCAGCATTTACCATTTATAATTGTCTGCTACATTGGAAAGCTTTTGAAGCAGAGAAGACAAGTATATTTGATCATCTTATTCAGTTGGTTGGTTCTGCAATAGAGGATCCAGACAATAATGATTGTATGGCATATTGGTTATCCAACACATCTGCTTTGTTGTTCCATCTCCAGCGAACTCTAAGAGTACCTACAGCAAAGAAACCACCCACTCCAACATCGTTTTTTGGGAGAATGACCCAAGGTTTCCGTTCATCCAACAGTCTTTCCGGTAATGCATTTGACGTAGTGCATCAAGTTGATGCCAAGTATCCAGCTTTGCTTTTCAAGCAGCAACTTGCAGCTTATGTGGAGAAGATTTATGGAATAGTTCGAGAAAATTTGAAGAAAGACTTGTCACCTCTACTTTCTTCTTGCGTTCAAGCACACAGAACATTGAATGACAACAGCTTGTGGCTCAGGATTACAGAACTCCTTAATAGATTTCTAAAGATTCTTCAAGAAAATTATGTGCATCCTGTTCTAGTTCAGAAAATATTTAGCCAGGTTTTTCAATACATTAATGTGGAACTCTTTAACAGCCTTGTTTCAAATAGAGAATGCTGCACATTCAGAAATGGAGAATATGTAAAAGCCGGGCTGGCTGAACTAGAACTATGGTGCAATGAAGCAACAGAAGAGTACACTAGCTCATCTTTGGATGAACTCGGACATGCGAGGCAAGCAGTTAGATTCTTGGTTGCACAACAGAAGGATGAACTAACCTATGATGATCTTACAAATGACATCTGTCCAGTCCTTAGCGCTCATCAACTTTATAGAATATGTACACTTTTCTGGGATGGAAGTGACAATGACAATGAAATTAAACAAAGTGTATCACAAGATGTCACTTCTAGCTTGAAGCTTCTAATGACAGATGGTGCAGATCATGATAGCAAATCCTACCTGTTGGAAGATAATTCAAGTATCCCTATCATTGTCGAAGAAATTTCTAGTTCCCTTAAAGATAAGACCACTCCAAAAGTGAAACCCCCAGAAGAACTTCTTGAGAATCCAGGCTTCCAATTTTTACATGATTATATATAG 4590 0.398 MIVTLNAQAAQLNFVVGSHVWIEDHDEAWIDGEILESSGAEIRVSCASGTKVVSKSAHVYPKDPEFPPHGVEDMTRLAYLHEPGVLQNLQIRYEINDIYTYTGNILIAVNPFQRLPHLYANETMEQYNGAPLGEKSPHPFAIADSAYRKMINEETSQSILVSGESGAGKTESTKMLMCYLAYMGGRAANEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQKGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPQEDIERYKLGNPSTFHYLNQSNCIELDGLDDSKEYRATRRAMDIVGISSNEQDAIFRIVAAVLHLGNIEFVKGEDEETDSSQPKDDKSFFHLETAADLLMCDDKALEDSFCKRVMVTRGEAITKSLDPTAAALSRDALAKIVYSRLFDWIVDKINNSIGQDPNSKNLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPRSTYETFAEKLYQTFNHNKRFSKPKFSRTDFTINHYAGDVTYQTELFLDKNKDYVVPEHAALLSASKCPFVSGLFPPLPEETTKSTKFSSVATQFKHQLQALLETLNATEPHYIRCVKPNNLLKPGIFENANVLQQLRCGGVMEAIRISCAGYPTRKNFDEFVQRFSILEPKVLKTCPDEMTACKMLLDNVNLTDYQIGKTKVFLRVGQMAELDACRAEVLGRSATIIQRKVCTFLCQKHYNLLRLSAIELQGVARGQLARHLYENMRREDASLKIQKNFRMYLSNNAYKTVHASAIYIQTAMRGMTARNDLKFRSKTKAAVVIQSHGRGYIVHTHFQRQKRAAIAAQCSWRRTLARRELRKLKMAAREAKALEAAKKDLEKQVEELTLSLQTEKRMREAKTQENEKLQSALQEMELQFRETEAILMKEREAAKKAAGQTSTIQELHINASGSELICKLTAENEQLKELVHSLERKNIQDLPLNFTENELINKLTSEKQHLEDEVNSLEKKIDETERKYEESNRLSEERMNQIIETESKMIELKKSKQRLEEKLSDMETENQVLRQQALLSSSSRRMSGKFSPSPAPLLENDHQASAGSTAAKTFGTDADSKLRRSQMERHQESVDTLFKCVQKDLGFSEGKPVAAFTIYNCLLHWKAFEAEKTSIFDHLIQLVGSAIEDPDNNDCMAYWLSNTSALLFHLQRTLRVPTAKKPPTPTSFFGRMTQGFRSSNSLSGNAFDVVHQVDAKYPALLFKQQLAAYVEKIYGIVRENLKKDLSPLLSSCVQAHRTLNDNSLWLRITELLNRFLKILQENYVHPVLVQKIFSQVFQYINVELFNSLVSNRECCTFRNGEYVKAGLAELELWCNEATEEYTSSSLDELGHARQAVRFLVAQQKDELTYDDLTNDICPVLSAHQLYRICTLFWDGSDNDNEIKQSVSQDVTSSLKLLMTDGADHDSKSYLLEDNSSIPIIVEEISSSLKDKTTPKVKPPEELLENPGFQFLHDYI* 1530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0277 1529 Pfam IQ calmodulin-binding motif 841 861 IPR000048 GO:0005515
Dod10g0277 1529 Pfam IQ calmodulin-binding motif 816 835 IPR000048 GO:0005515
Dod10g0277 1529 MobiDBLite consensus disorder prediction 1095 1132 - -
Dod10g0277 1529 CDD MYSc_Myo11 83 729 IPR036018 -
Dod10g0277 1529 SMART DIL_2 1345 1452 IPR002710 -
Dod10g0277 1529 ProSiteProfiles IQ motif profile. 767 796 IPR000048 GO:0005515
Dod10g0277 1529 Gene3D Kinesin motor domain 72 671 IPR036961 -
Dod10g0277 1529 Gene3D - 448 632 - -
Dod10g0277 1529 ProSiteProfiles IQ motif profile. 816 844 IPR000048 GO:0005515
Dod10g0277 1529 ProSiteProfiles IQ motif profile. 792 818 IPR000048 GO:0005515
Dod10g0277 1529 Gene3D - 259 317 - -
Dod10g0277 1529 PANTHER MYOSIN HEAVY CHAIN 1006 1526 - -
Dod10g0277 1529 PANTHER MYOSIN HEAVY CHAIN 12 943 - -
Dod10g0277 1529 ProSiteProfiles IQ motif profile. 840 869 IPR000048 GO:0005515
Dod10g0277 1529 PANTHER MYOSIN 1006 1526 - -
Dod10g0277 1529 PANTHER MYOSIN 12 943 - -
Dod10g0277 1529 Pfam Myosin N-terminal SH3-like domain 17 55 IPR004009 GO:0003774|GO:0005524|GO:0016459
Dod10g0277 1529 SMART MYSc_2a 63 742 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod10g0277 1529 ProSiteProfiles IQ motif profile. 863 892 IPR000048 GO:0005515
Dod10g0277 1529 Gene3D Myosin VI head, motor domain, U50 subdomain 319 610 - -
Dod10g0277 1529 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 15 64 IPR004009 GO:0003774|GO:0005524|GO:0016459
Dod10g0277 1529 ProSiteProfiles Myosin motor domain profile. 69 741 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod10g0277 1529 ProSiteProfiles Dilute domain profile. 1191 1474 IPR002710 -
Dod10g0277 1529 Coils Coil 1014 1090 - -
Dod10g0277 1529 PRINTS Myosin heavy chain signature 203 230 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod10g0277 1529 PRINTS Myosin heavy chain signature 156 181 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod10g0277 1529 PRINTS Myosin heavy chain signature 491 519 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod10g0277 1529 PRINTS Myosin heavy chain signature 99 118 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod10g0277 1529 PRINTS Myosin heavy chain signature 438 466 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod10g0277 1529 SMART iq_5 766 788 IPR000048 GO:0005515
Dod10g0277 1529 SMART iq_5 862 884 IPR000048 GO:0005515
Dod10g0277 1529 SMART iq_5 791 813 IPR000048 GO:0005515
Dod10g0277 1529 SMART iq_5 743 765 IPR000048 GO:0005515
Dod10g0277 1529 SMART iq_5 814 836 IPR000048 GO:0005515
Dod10g0277 1529 SMART iq_5 839 861 IPR000048 GO:0005515
Dod10g0277 1529 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 792 IPR027417 -
Dod10g0277 1529 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 792 891 IPR027417 -
Dod10g0277 1529 Gene3D - 744 793 - -
Dod10g0277 1529 Gene3D - 794 842 - -
Dod10g0277 1529 Gene3D - 843 892 - -
Dod10g0277 1529 Pfam DIL domain 1346 1447 IPR002710 -
Dod10g0277 1529 Coils Coil 876 955 - -
Dod10g0277 1529 Pfam Myosin head (motor domain) 71 729 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod10g0277 1529 Gene3D - 676 739 - -
Dod10g0277 1529 CDD MyosinXI_CBD 1142 1496 IPR037975 GO:0007015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0277 Dod-Chr10 7592728 7611888 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0277 6 1526 Myosins gene family AT5G43900 63.449 0.0 1977
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0277 K10357 - gmx:100788123 2340.46