Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0260 ATGGCTCTTAGATTTCCAAACATGACTATTACATTTGTTGTCACGCTGGTGCTATTTGGCACCATATGCGATGCCCAGTTGTCCTCTAACTTTTACGACACAGCATGCCCAAATGCACTTAGCACCATCCGAAACGTGATTCGTACTGCAGTATCCAAGGAACGCAGGATGGCTGCGTCTCTCATTCGTCTCCATTTCCATGACTGCTTTGTTCAGGGTTGTGATGCATCGATCTTGCTTGATGACACCCCAACTTTCGTGGGAGAAAGGACTGCATTGCCTAATGTGAACTCAGTTAGGGGCTTCAACGTCATCGATCAAGCTAAAACCGCCGTAGAGAAACTTGGCAGGAGAGATTCTACCAATGCAAATAAGGACTTGGCTAATAGCGACCTTCCAAAATTCACAGATAGTCTTGACGCTCTTATATCTACCTTTGACAAGAAAGGGCTTACTGCAAGGGACATGGTTACACTGTCTGGTGCTCACACAATAGGACAAGCACAGTGCTTCACATTCCGTGAGAGAATATACAACAATGGGAGCAACATAGATGCCGGATTGGCGAGCACCCGCCGCCGGGGTTGCCCATCAGTGAGCAGTCCTGATAACGACAACAAGTTGGCAGCACTTGATCTGGTGACCCCAAGCTCTTTCGACAACAACTATTTCAAGAACTTGATCCAAAACAAGGGTCTTCTTCACTCAGACCAGGTCCTCTTCAGTGGAGGAGGATCCACCGATAGCGTTGTTTCTGAGTACAGCAAAAATCCCACAACCTTTAAATCTGACTTCGCATCTGCCATGATAAAGATGGGAGACATTCAGCCTTTGACGGGCTCCGCTGGGGTCATAAGAAAGATATGCAGCGCCATCAACTAA 882 0.4717 MALRFPNMTITFVVTLVLFGTICDAQLSSNFYDTACPNALSTIRNVIRTAVSKERRMAASLIRLHFHDCFVQGCDASILLDDTPTFVGERTALPNVNSVRGFNVIDQAKTAVEKLGRRDSTNANKDLANSDLPKFTDSLDALISTFDKKGLTARDMVTLSGAHTIGQAQCFTFRERIYNNGSNIDAGLASTRRRGCPSVSSPDNDNKLAALDLVTPSSFDNNYFKNLIQNKGLLHSDQVLFSGGGSTDSVVSEYSKNPTTFKSDFASAMIKMGDIQPLTGSAGVIRKICSAIN* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0260 293 Pfam Peroxidase 114 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod10g0260 293 ProSiteProfiles Plant heme peroxidase family profile. 26 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod10g0260 293 CDD secretory_peroxidase 26 292 IPR033905 GO:0004601|GO:0042744
Dod10g0260 293 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Dod10g0260 293 Gene3D - 27 114 - -
Dod10g0260 293 Gene3D Peroxidase, domain 2 133 272 - -
Dod10g0260 293 PRINTS Haem peroxidase superfamily signature 212 227 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod10g0260 293 PRINTS Haem peroxidase superfamily signature 107 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod10g0260 293 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod10g0260 293 PRINTS Haem peroxidase superfamily signature 155 170 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod10g0260 293 SUPERFAMILY Heme-dependent peroxidases 26 293 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dod10g0260 293 ProSitePatterns Peroxidases proximal heme-ligand signature. 155 165 IPR019793 -
Dod10g0260 293 Gene3D - 115 293 - -
Dod10g0260 293 PANTHER PEROXIDASE 114 292 - -
Dod10g0260 293 PANTHER PEROXIDASE 7 115 - -
Dod10g0260 293 PRINTS Plant peroxidase signature 267 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod10g0260 293 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod10g0260 293 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod10g0260 293 PRINTS Plant peroxidase signature 226 243 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod10g0260 293 PRINTS Plant peroxidase signature 210 225 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod10g0260 293 PANTHER PEROXIDASE 72-RELATED 114 292 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod10g0260 293 PANTHER PEROXIDASE 72-RELATED 7 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0260 Dod-Chr10 7267511 7268960 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0260 4 293 Peroxidase AT1G14550 59.006 8.93e-131 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0260 K00430 - gmx:100786161 444.891