Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0243 ATGGTTGAGGTGGCAGAGGGAGGAGCAGGAGCAGAGGGCGAGGAAGGAAAGGAAGGAAGAGCAAGGGTGGCAGCGGCTACAGAGTGGTTGTTGGGGTGGGTGGTGGTGGCTATGGGTATGGGGAGGGATATTGTTCACCTTAAACTAGAACCAACAGATGAGAACGAAAGGCTTAAAAATGCCTATGTTGCTCTCCAAGCGTGGAAAGAGGCTATCCACTCAGACCCTTTCAACACAACTGGCAACTGGGTTGGTGATGATGTTTGCTCATACAATGGTGTTTTCTGTGCTCCTGCTCTCGATGATCCTACATTGAGTGTTGTTGCTGGTGTTGATCTTAACCATGCAGACATTGCTGGGCACCTCCCAGATGAGCTAGGCCTCTTGACCGATGTTGCACTTTTCCACATCAACTCCAATAGATTTTGTGGAATTGTCCCACAAAGCTTAGAGAAGCTCTCTCTTATGTATGAGTTTGATATAAGCAACAATCGCTTTGTTGGTATCTTTCCCGATGTGGTCCTCACGTGGCCAGAGTTGAAGTACCTAGACATCAGATATAATGAGTTTGAAGGGCCTCTACCTCCACAACTGTTTGAGAAGGAGCTTGATGCAATCTTCTTGAATAATAATCGTTTCACATCTATTATTCCAGGAACTCTTGGGAAGTCAAAGGCCTCAGTGATCACTTTTGCTAACAACAAATTCACCGGTTGCATCCCAAATTCTATTGGGAGCATGGCGAACCTGAATGAGATTGTCTTCTTAGGCAATAACCTTGGAGGTTGTCTCCCTCAGGAGATTGGACTCCTGGGAAATGCAGTTGTTTTGGATGCTAGCAATAATGGGTTTGTAGGCACTCTGCCTAATATGTCGAGTTTGAAGAATGTGGAGGTCATAGACATCACAAACAACAAGCTTAGTGGATATGTCTCCAATACGATTTGCCAGTTACCTTCATTGAAGAACTTCACATTCTCTGATAACTACTTCAATGGGGAAGGTCAAGGTTGTGTGTCATCATCATCAAATTCATCTATTGTTATTGGTGACTCAGGAAATTGTTTGTCAGGGAGGAAGAATCAAAAGTCATCCAAAGAATGCTTACCTGTGCTAACTCGCCCTGTAGATTGTAGCAAGCAGTGTGGTGGAGAAAATAGAGAAAGTCATCATGTCCCCTCAACACCAAAAGCTAAGCCACCTCCAAAACCAAAGGCTAAAGCACCTCCAACCCCACATGTTATTCACTCTCCTCCACCACCACATGTTCACTCTCCACCTCCACCAGTTCATTCTCCTCCACCACCACCACCACCACCCACAGCTCACTCTCCTCCACCACCAATTTATTCTCCTCCTCCACCAATCCACTCACCACCACCACCGCCACCCCCACTAATTTACTCTCCTCCTCCCCTAGTCCATTCTCCACCACCACCGGTTTCCTCACCTCCTCCACCAATTCATTCTCCATTATCACCGCCTATTTACTCTCCTCCTCCCCCAGTCCACTCTCCACCACCACCAATTCACTCATCTCCACCCCTAGTATATTCTCCTCCTCCGCCAATTCACTCACCTCCTCCTCCAGTTCACTCACCGCCACCACCACCACCACCACCAATTCACTCTCCTCCTCCCCTCGTACATTCCCCACCCCCACCAATTCACTCTCCTCCTCCCCCGGTCTATTCTCCACCGCTGTCACCACCAACCAATCACCCACCACCACCAAAGTGGGAAGATGTCGCCCTCCCACCATTCTACGGAGCTCAATACAGTTCACCTCCTCCACCAACGGTTGTTGGATACTAA 1815 0.481 MVEVAEGGAGAEGEEGKEGRARVAAATEWLLGWVVVAMGMGRDIVHLKLEPTDENERLKNAYVALQAWKEAIHSDPFNTTGNWVGDDVCSYNGVFCAPALDDPTLSVVAGVDLNHADIAGHLPDELGLLTDVALFHINSNRFCGIVPQSLEKLSLMYEFDISNNRFVGIFPDVVLTWPELKYLDIRYNEFEGPLPPQLFEKELDAIFLNNNRFTSIIPGTLGKSKASVITFANNKFTGCIPNSIGSMANLNEIVFLGNNLGGCLPQEIGLLGNAVVLDASNNGFVGTLPNMSSLKNVEVIDITNNKLSGYVSNTICQLPSLKNFTFSDNYFNGEGQGCVSSSSNSSIVIGDSGNCLSGRKNQKSSKECLPVLTRPVDCSKQCGGENRESHHVPSTPKAKPPPKPKAKAPPTPHVIHSPPPPHVHSPPPPVHSPPPPPPPPTAHSPPPPIYSPPPPIHSPPPPPPPLIYSPPPLVHSPPPPVSSPPPPIHSPLSPPIYSPPPPVHSPPPPIHSSPPLVYSPPPPIHSPPPPVHSPPPPPPPPIHSPPPLVHSPPPPIHSPPPPVYSPPLSPPTNHPPPPKWEDVALPPFYGAQYSSPPPPTVVGY* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0243 604 Pfam Leucine rich repeat N-terminal domain 62 96 IPR013210 -
Dod10g0243 604 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 50 407 - -
Dod10g0243 604 SUPERFAMILY L domain-like 62 345 - -
Dod10g0243 604 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 485 599 - -
Dod10g0243 604 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 50 407 - -
Dod10g0243 604 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 485 599 - -
Dod10g0243 604 Gene3D Ribonuclease Inhibitor 60 354 IPR032675 -
Dod10g0243 604 PRINTS Proline rich extensin signature 443 464 - -
Dod10g0243 604 PRINTS Proline rich extensin signature 390 402 - -
Dod10g0243 604 PRINTS Proline rich extensin signature 426 438 - -
Dod10g0243 604 PRINTS Proline rich extensin signature 404 420 - -
Dod10g0243 604 MobiDBLite consensus disorder prediction 382 604 - -
Dod10g0243 604 MobiDBLite consensus disorder prediction 395 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0243 Dod-Chr10 6916909 6920538 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0243 54 380 Trihelix Transcription Factor Family AT1G49490 69.817 2.53e-172 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0243 - - gsj:114419228 563.918