Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0205 ATGGGGAGGATCAAACCTCAGGCTCTGCTACAGCAAAGCAAAAGGAAGAAAGGCCCTTCCGGCATAAGTGCCACATCTATTACATTTTACACATTGATTCTTGTCTTGTTTGCATTTTTCCTGTTTGCTATATTCAGAGATTGGTCCAACAGGTCTAGATTACAACCAGAGAATGGCATATCAATCTCTGAGGATGAATATACTTTTGCAGAATCCAGGAAATCTGAGCTACCTGAATATGCTGTTTTGAAAACCTCTAAAGGTTCTATAATAATAGAACTTTACAAGGAAAGTGCTCCTGAAGTTGTTGACGAATTCATTGAATTATGTCAAAACGGGCACTTCAAGGGAATGCTTTTTCACCAAGTAATAAAGAACTATGTGATTCAGGCAAGTCATAACCAAGGTCCAGGGGCTACTGAAGATTGGAATCTGAGAGGAAAGAAATATACAAGCATGAAACATGAAGCATTCATGCTTGGAACTTCTAAGGGAAAACACTTTAACAAGGGATTTGATCTTTTCATCACGACTGCACCAATACCAGATCTAAATGAGAAGCTTATTGTGTTTGGGCGGGTCATCAAGGGAGAAGATGTTGTTCAGGAAATTGAAGAAGTGGATACAGATGAACATTACCAACCTAAAATTTCTATTGGGATACTTGATGTAGTCCTTCAACAGATGTTCTGA 693 0.3867 MGRIKPQALLQQSKRKKGPSGISATSITFYTLILVLFAFFLFAIFRDWSNRSRLQPENGISISEDEYTFAESRKSELPEYAVLKTSKGSIIIELYKESAPEVVDEFIELCQNGHFKGMLFHQVIKNYVIQASHNQGPGATEDWNLRGKKYTSMKHEAFMLGTSKGKHFNKGFDLFITTAPIPDLNEKLIVFGRVIKGEDVVQEIEEVDTDEHYQPKISIGILDVVLQQMF* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0205 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 109 IPR002130 GO:0000413|GO:0003755
Dod10g0205 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 186 201 IPR002130 GO:0000413|GO:0003755
Dod10g0205 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 173 185 IPR002130 GO:0000413|GO:0003755
Dod10g0205 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 132 IPR002130 GO:0000413|GO:0003755
Dod10g0205 230 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 77 226 IPR002130 GO:0000413|GO:0003755
Dod10g0205 230 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 229 - -
Dod10g0205 230 SUPERFAMILY Cyclophilin-like 78 226 IPR029000 -
Dod10g0205 230 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 1 229 - -
Dod10g0205 230 CDD cyclophilin 82 223 - -
Dod10g0205 230 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 82 224 IPR002130 GO:0000413|GO:0003755
Dod10g0205 230 Gene3D - 65 230 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0205 Dod-Chr10 6015965 6020067 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0205 80 226 U-box Gene Family AT5G67530 28.571 2.36e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0205 - - gmx:100796043 378.252