Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0204 ATGGAATCTCTGCTCTCATCTCAGAACCCCAACCACCCCACCGCCACCACTTTCCCTCTCTTCCCCCCTGGAATCCCCATCCCCACCACCGCCACCAAAAACGCCCTCTCCGCCACCGCTCCCAAAATCCCAACCCCATTTCTCATTATCCCCAAACCCGAACCCTTAGATGAATGCCCCACCACCACCACCACCACCGCCGCCGCCACCGCCACCGCCAACGACAACGACAACAACAACAGTCAACAAAACCAACCAATCTCCTCGAATGGGCCCCACCAACTGGCCAACCTCGTCTGCGACGAAACCCTACCCTCACCCTCAACTCCCGCCTCCTCCTCTGACCAAAACAACAACAACAACTTATCCACGGAGTTCAACCGAGTCTCCCAGCTCTTCCGCACCGCCTTCGCCCAGCAGCTGCAGCAGCAGCAAAACGACGCCGTTTCGGACCCTAATTCGCGGGCAATCGTGCCCGTCGCTCCACCGGAGAGCAGCAACAACGGGAATATCAGCAGCAGCAACGACGGATCTTCCTCTTCCGCGGCAGCGACAACGGCGCTGGCTAAGCGGAGCAGCCGCTGCAAGGATCTCGTGAGAGTGAAGGATCTGAGGATCGACGACCACCGCCATTTCCGGGACCTGGTGAGGCGGACGAGGATGATCTACGACTCGCTCCGCGTGCTGGCCTTCGCCGAGGAGGAGCGGAGGATGCAGCTAACTGACTTGAGGAAGGCGAGGGGCGACCTCAGGGCCTCCAATCTGATGAAGAGCTGCGGTTTGTGGCTCAACCGCGACAAGCGGATCGTCGGCCCCATCCCCGGCGTCTGCGTCGGCGACGTCTTCCTCTACAGGATGGAGCTCTGCGTGGTCGGCCTCCACGGGCAGACGCAGGCCGGAATCGATTACCTCCCCGCCAGCATGAGCTCCAATGGCGAGCCAATTGCCACCAGTGTCATTGTCTCTGGCGGTTACGAGGATGACATGGATGAGGGTGATGTCATCATATACTCTGGCCATGGTGGCCAGGACAAGCATTCCAGGCAGGTGTTTCATCAGAAGCTTGAAGGAGGGAACCTGGCCATGGAGAGGAGTATGCATTATGGGATTGAAGTGAGGGTCATTCGCGGGATTCGGTATGAGGGTACTGCTACTGCTGCTGGTAAAGTTTATGTCTATGATGGCTTGTATAGGATTCTTGATTGCTGGTTTGATGTTGGGAAGTCGGGTTTCGGTGTGTATAAGTATAAGCTTTCGAGGATTGATGGGCAGGCTAAGATGGGTAGTGCTGTTCTTAAGGAGGCTTGTATGCTTAGGAGGGACCCTTTGAGTCTTAAGCCCATGGGTTGCTTGTCACTTGACATCTCCAACAAGAGGGAGAATGTCGCGGTTAGGCTTTTTAATGACATAGATAAGAGTCATGACCCGCTTTGTTTTGAGTATCTCGCGAGGACTAACTTCCCGCCGTTTGTGTTTCATCAGACCGGGAGGGCCACGGGTTGTGAGTGTGTGGATGGCTGCTTTGAAGGGTGCTTTTGCGCCATGAAGAACGGGGGCGAGTTCCCTTATAATCAGAATGGGATTCTCTTGGGAGGGAAGCCTTTGATTTTCGAGTGTGGCCCCTTTTGCCGGTGTCCTCCTCATTGCCGGAATCGTGTCTCGCAGAAGGGGCTGAAGAATAGGTTGGAAGTGTTTAGGTCTAGGGAAACTGGTTGGGGAGTCAGGTCACTGGACCTAATTCAAGCCGGTGCTTTTATCTGTGAGTACACGGGTGTTGTTCTGACGAGGCAGCAAGCACAGATTTTGACGATGAATGGTGATGCGTTGATATATCCAAACCGGTTTACTGATAGGTGGGCAGAATGGGGGGATCTATCTCTGATAGATTCCAATTATGTTCGTCCGTCGTATCCCTCAATTCCTCCTTTGGATTTTGCTTTGGATGTGTCGAGAATGAGGAATGTTGCCTGCTATATTAGTCATAGTTCATCTCCGAATGTGATGGTTCAGTTTGTTCTGTTCGATCACAATAATCTGATGTTCCCTCACCTTATGCTATTTGCAACGGAGAGCATCCCGCCAATGAGAGAGCTCAGCCTTGATTATGGGGTGGCTGATGAGTGGACAGGCAAGCTCTCTATATGCAACTGA 2151 0.5384 MESLLSSQNPNHPTATTFPLFPPGIPIPTTATKNALSATAPKIPTPFLIIPKPEPLDECPTTTTTTAAATATANDNDNNNSQQNQPISSNGPHQLANLVCDETLPSPSTPASSSDQNNNNNLSTEFNRVSQLFRTAFAQQLQQQQNDAVSDPNSRAIVPVAPPESSNNGNISSSNDGSSSSAAATTALAKRSSRCKDLVRVKDLRIDDHRHFRDLVRRTRMIYDSLRVLAFAEEERRMQLTDLRKARGDLRASNLMKSCGLWLNRDKRIVGPIPGVCVGDVFLYRMELCVVGLHGQTQAGIDYLPASMSSNGEPIATSVIVSGGYEDDMDEGDVIIYSGHGGQDKHSRQVFHQKLEGGNLAMERSMHYGIEVRVIRGIRYEGTATAAGKVYVYDGLYRILDCWFDVGKSGFGVYKYKLSRIDGQAKMGSAVLKEACMLRRDPLSLKPMGCLSLDISNKRENVAVRLFNDIDKSHDPLCFEYLARTNFPPFVFHQTGRATGCECVDGCFEGCFCAMKNGGEFPYNQNGILLGGKPLIFECGPFCRCPPHCRNRVSQKGLKNRLEVFRSRETGWGVRSLDLIQAGAFICEYTGVVLTRQQAQILTMNGDALIYPNRFTDRWAEWGDLSLIDSNYVRPSYPSIPPLDFALDVSRMRNVACYISHSSSPNVMVQFVLFDHNNLMFPHLMLFATESIPPMRELSLDYGVADEWTGKLSICN* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0204 716 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE FAMILY MEMBER SUVH2-RELATED 65 713 - -
Dod10g0204 716 Pfam SAD/SRA domain 270 424 IPR003105 -
Dod10g0204 716 ProSiteProfiles Pre-SET domain profile. 499 557 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Dod10g0204 716 MobiDBLite consensus disorder prediction 1 15 - -
Dod10g0204 716 SUPERFAMILY SET domain 445 715 IPR046341 -
Dod10g0204 716 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 65 713 - -
Dod10g0204 716 SMART preset_2 452 544 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Dod10g0204 716 ProSiteProfiles PUA domain profile. 361 379 - -
Dod10g0204 716 ProSiteProfiles SET domain profile. 560 703 IPR001214 GO:0005515
Dod10g0204 716 Pfam SET domain 571 703 IPR001214 GO:0005515
Dod10g0204 716 Gene3D SET domain 429 716 IPR046341 -
Dod10g0204 716 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 124 716 IPR025794 GO:0016571
Dod10g0204 716 SUPERFAMILY PUA domain-like 252 432 IPR015947 -
Dod10g0204 716 SMART G9a_1 266 424 IPR003105 -
Dod10g0204 716 Pfam Pre-SET motif 455 552 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Dod10g0204 716 SMART set_7 560 709 IPR001214 GO:0005515
Dod10g0204 716 MobiDBLite consensus disorder prediction 160 185 - -
Dod10g0204 716 MobiDBLite consensus disorder prediction 72 122 - -
Dod10g0204 716 MobiDBLite consensus disorder prediction 1 22 - -
Dod10g0204 716 Gene3D - 268 428 IPR036987 -
Dod10g0204 716 MobiDBLite consensus disorder prediction 140 185 - -
Dod10g0204 716 ProSiteProfiles YDG domain profile. 271 420 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0204 Dod-Chr10 5993817 6000468 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0204 213 705 Su(var)3-9 homologs AT5G04940 38.370 1.93e-103 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dod10g0204 SAD_SRA 5e-48 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0204 K11420 - gmx:100795514 971.459