Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0189 ATGTCAGAGTCAAACGCAGTAGCAAATGGCTTGGCTGGTGCAGGCGGTGGTATTATTGCTCAAATCATAACTTATCCTCTTCAAGCGGTGAACACACGCCAGCAAACTGAGAGAACACTCAAGAGGAACAAGCAGAGTTTGCTTCTTCAGTCTTCCAACACAACCACTGTTCCTGCTCCTGGCACTCTTCTTCAGATCCTTCAGGTCATTGGAAGTGAAGGCTGGGGTGGACTCTACAGTGGCCTCAAGCCTTCTCTTCTTGGAACTGCTGCTTCACAGGGCATATACTACTATTTCTATCAGGTTTTTAAGAACAAGGCTGTGGCTATTGCAGCTGCCAGAAAAGTGAAAGGGCGTGGAGATGGTACTGTTGGCATGTTTGGTTGGCTCGTTGTTGCTGCTATAGCTGGGTCCTTGAATGTGTTGCTAACAAACCCAATATGGGTTCTAGTGACTCGTATGCAGACTCATACACAAGCAGAAAGAAAAATCATGGAGGAAAAGAAAGAAGCTGTAAGGAGGGCATCTTCAGAAAGCAGCTTAGAAGGCTTAACATTACAAGACAACTTGGCCGAACTGGATTCTATAAAACCTCGACCATATGGAACCATACATGCAGCTAATGAAGTCTATAGTGAAGCGGGTGTTGTTGGATTTTGGAAGGGTGTCATCCCTGCGCTTATTATGGTCTGCAATCCATCAATACAGTTCATGATTTATGAGAGCTCATTAAATCATCTAAGGGCGAAACGATCTGCTAAGAAGCAGGGTGATAAAAGTGTATCTGCTTTGGAGGTCTTTCTGCTGGGAGCATTAGCTAAACTTGGAGCGACTGTCTCAACATATCCCTTACTAGTTGTCAAGTCAAGGCTTCAGGCAAAACAGGAGATTGGTGGTAGTAACTCATTAAGATACTCAGGTACCTTTGATGCAATACTTAAAATGATCCGTTATGAAGGATTACCTGGATTTTATAAGGGGATGAGCACAAAGATAGTACAGAGTGTTTTTGCAGCTTCTGTTCTATTCATGGTTAAGGAGGAGCTTGTTAAGGCTTTCATTTTGCTGGTAGATAAGAGCAAGAAAGTCCTACCAAATTTGAGTAATTGA 1110 0.4333 MSESNAVANGLAGAGGGIIAQIITYPLQAVNTRQQTERTLKRNKQSLLLQSSNTTTVPAPGTLLQILQVIGSEGWGGLYSGLKPSLLGTAASQGIYYYFYQVFKNKAVAIAAARKVKGRGDGTVGMFGWLVVAAIAGSLNVLLTNPIWVLVTRMQTHTQAERKIMEEKKEAVRRASSESSLEGLTLQDNLAELDSIKPRPYGTIHAANEVYSEAGVVGFWKGVIPALIMVCNPSIQFMIYESSLNHLRAKRSAKKQGDKSVSALEVFLLGALAKLGATVSTYPLLVVKSRLQAKQEIGGSNSLRYSGTFDAILKMIRYEGLPGFYKGMSTKIVQSVFAASVLFMVKEELVKAFILLVDKSKKVLPNLSN* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0189 369 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 246 IPR018108 -
Dod10g0189 369 ProSiteProfiles Solute carrier (Solcar) repeat profile. 261 352 IPR018108 -
Dod10g0189 369 PANTHER PEROXISOMAL NICOTINAMIDE ADENINE DINUCLEOTIDE CARRIER 4 361 - -
Dod10g0189 369 Gene3D Mitochondrial carrier domain 12 355 IPR023395 -
Dod10g0189 369 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 4 361 IPR044712 GO:0006862|GO:0055085
Dod10g0189 369 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 106 IPR018108 -
Dod10g0189 369 SUPERFAMILY Mitochondrial carrier 5 348 IPR023395 -
Dod10g0189 369 Pfam Mitochondrial carrier protein 124 248 IPR018108 -
Dod10g0189 369 Pfam Mitochondrial carrier protein 260 353 IPR018108 -
Dod10g0189 369 Pfam Mitochondrial carrier protein 4 105 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0189 Dod-Chr10 5504465 5509199 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0189 26 355 Chloroplast and Mitochondria Gene Families AT2G47490 29.042 1.90e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0189 K13354 - gmx:100777898 598.586