Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0147 ATGTTTCTTCGTTGGTATTGCTTTGCATGTCTTTTTCTCTTGGTGGATTTGGGAGTAGTTGTAGAGCAGGCTAATGCTCAGTATTACCGAAAAGTTGGAGACAAACTTCTCCCTTACAGGACAATTGTTGTGGACTCATCTGGAAATACTGGAAACTTCTCTACCATACAATCTGCAATTGATTCAGTCCCTTCCAACAACAGGTATTGGGTTTCAATCAAGGTGAAGGCAGGTACTTACAGGGAAAAAGTGAAGATCCCTTATGATAAGCCTTACATCATACTAAAAGGAGAGGGAAAGAGGAAAACGTCGGTTGAATGGGGTGACCATGATGCAACCTCACAGAGCCCCACGTTCGAAACCTTGGCTGGCAATGTTGTCGTCAAATCCATCAGTTTTAGGAATTCATACAACAATCCCATAAATAATAAACCCAAGGTAGCTGCAGTAGCTGCGAAGATAAGCGGCGACAAGTCTTACTTTTATAGAGTTGGCTTCTTCGGTTTGCAAGACACTTTGTGGGACGATCAAGGAAGACATTACTACAAGCTTTGTACCATACAAGGTGCCATTGACTTTATCTTTGGTGCAGGCCAATCTTTGTTTGAGAGGTGTTCCATAGCTGTAATTGGTGAAGCCTTAGGTTCAGGCCTTTCTGGTTATATAACAGCACAAGGGAGAACAAATCCAAGCGATGCGAATGGGTTTGTGTTCAAGAGTTGCAATGTGTTCGGAAATGGGACAGCTTACTTGGGAAGACCTTGGAGAGGCTACGCTAGAGTTCTGTTCTATAATACCAGCATGTCCAAGGTCGTGCAAGCCAGTGGTTGGGAGCCATGGAAATTCGTCGGACATGAGGATCACATTACATTTGCAGAGGATGGCAACTTCGGACCAGGCTCTGATACTTCGAGACGAGTGAGTTGGCTTAAGAAGTTGGATTTAGCGACAGTGAATAACATGGCAAGTATGGACTTCATTGACTCCGAAGAATGGCTTCAGAACCAACAGTTCTAA 1017 0.4385 MFLRWYCFACLFLLVDLGVVVEQANAQYYRKVGDKLLPYRTIVVDSSGNTGNFSTIQSAIDSVPSNNRYWVSIKVKAGTYREKVKIPYDKPYIILKGEGKRKTSVEWGDHDATSQSPTFETLAGNVVVKSISFRNSYNNPINNKPKVAAVAAKISGDKSYFYRVGFFGLQDTLWDDQGRHYYKLCTIQGAIDFIFGAGQSLFERCSIAVIGEALGSGLSGYITAQGRTNPSDANGFVFKSCNVFGNGTAYLGRPWRGYARVLFYNTSMSKVVQASGWEPWKFVGHEDHITFAEDGNFGPGSDTSRRVSWLKKLDLATVNNMASMDFIDSEEWLQNQQF* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0147 338 ProSitePatterns Pectinesterase signature 2. 187 196 IPR033131 -
Dod10g0147 338 Gene3D - 38 338 IPR012334 -
Dod10g0147 338 Pfam Pectinesterase 43 328 IPR000070 GO:0030599|GO:0042545
Dod10g0147 338 SUPERFAMILY Pectin lyase-like 38 334 IPR011050 -
Dod10g0147 338 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 17 337 - -
Dod10g0147 338 PANTHER PECTINESTERASE 10-RELATED 17 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0147 Dod-Chr10 4694629 4701249 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0147 40 286 Carbohydrate Esterase AT2G19150 45.968 1.55e-73 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0147 - - gmx:100819252 511.531