Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0146 ATGGCTCAAACTGGAATTTTAGTATCTATAAATGGGGAAGTGGCTGGGGTTTTGGCAATATCTGATCCATTGAAACCAAGTGCTGAAGAAGTCATTTCCATTCTCAAGTCTATGAAAATTAGGAGCATCATGGTGACCGGGGACAATTGGGGTACAGCTAATTCTATTGCAAAGGAAGTTGGAATAGAAACTGTTATTGCTGAGGCCAAACCAGAGCAGAAAGCACATGAAGTGAAGGAATTGCAGGCTTCGGGGAACACAGTGGCTATGGTGGGGGATGGTATCAATGACTCACCTGCACTTGTCGCAGCCGATGTGGGGATGGCAATAGGTGCTGGTACAGATATTGCCATCGAGGCAGCTGATATTGTCCTTATGAAGAGCAACTTGGAGGATGTCATAACTGCCATTGATCTTTCCAGAAAAACATTTTCCCGTATACGCTTGAACTACTTTTGGGCTTTGGGTTATAATCTCCTTGGCATCCCAATTGCTGCTGGAGCTCTTTTCCCTTCTACAAGATTCCGATTGCCACCCTGGATTGCTGGGGCTGCTATGGCTGCTTCTTCTGTCAGTGTTGTTTGTTGCTCTCTATTGTTGAAATATTACAGGAGACCTAGGAAGCTGGACAACCTTGAGATACGGGGCATAAGGATCGACTCATCGAGTGATACTATGCATGAATATTGA 690 0.4493 MAQTGILVSINGEVAGVLAISDPLKPSAEEVISILKSMKIRSIMVTGDNWGTANSIAKEVGIETVIAEAKPEQKAHEVKELQASGNTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYFWALGYNLLGIPIAAGALFPSTRFRLPPWIAGAAMAASSVSVVCCSLLLKYYRRPRKLDNLEIRGIRIDSSSDTMHEY* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0146 229 PANTHER ATP7, ISOFORM B 1 212 - -
Dod10g0146 229 SUPERFAMILY HAD-like 7 197 IPR036412 -
Dod10g0146 229 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 7 173 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod10g0146 229 PRINTS P-type cation-transporting ATPase superfamily signature 16 27 - -
Dod10g0146 229 PRINTS P-type cation-transporting ATPase superfamily signature 38 48 - -
Dod10g0146 229 PRINTS P-type cation-transporting ATPase superfamily signature 91 110 - -
Dod10g0146 229 PRINTS P-type cation-transporting ATPase superfamily signature 114 126 - -
Dod10g0146 229 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 1 212 - -
Dod10g0146 229 Gene3D - 6 158 IPR023214 -
Dod10g0146 229 Pfam haloacid dehalogenase-like hydrolase 11 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0146 Dod-Chr10 4689252 4691367 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0146 1 220 Primary Pumps ATPases AT1G63440 86.818 4.01e-131 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0146 K17686 - gmx:100816893 378.637