Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0145 ATGAGAATGGAGTGTTGCATATTAAGGCAACACGGGTCGGATCAGAAAGTGCACTTTCCCAGATCGTTCGACTTGTTGAGTCAGCACAAATGGCCAAGGCTCCTGTGCAGAAGTTTGCTGACCGCATTTCGAAATACTTTGTGCCTTTGGTCATCTTCATTGCATTTACTAACTTGGCTTGTTTGGTTTTTGGCTGGAAGATTTCATGCTTATCCAAAGTCTTGGATACCATCTTCTATGGATAGTTTTCAGCTTGCTTTGCAGTTTGGGATCTCTGTCATGGTCATAGCGTGCCCTTGTGCTTTAGGTTTGGCAACACCGACTGCTGTTATGGTCGGCACTGGGGTTGGTGCATCGCAGGGTGTACTGATTAAAGGAGGGCAAGCATTAGAAAGTGCACATAAGGTGAATTGCATTGTTTTTGACAAGACAGGTACTCTCACTGTCGGGAAACCTGTGGTAGTAAATACAAAACTACTGACAAATATGCTGCTCCGAGAGTTTTATGAACTTGTAGCTGCAGCTGAGGTGAATAGTGAGCATCCACTGGCTAAGGCCATTGTTGAATATGCCAAAAGGATTTAG 585 0.4444 MRMECCILRQHGSDQKVHFPRSFDLLSQHKWPRLLCRSLLTAFRNTLCLWSSSLHLLTWLVWFLAGRFHAYPKSWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVNTKLLTNMLLREFYELVAAAEVNSEHPLAKAIVEYAKRI* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0145 194 Pfam haloacid dehalogenase-like hydrolase 136 193 - -
Dod10g0145 194 Pfam E1-E2 ATPase 39 118 - -
Dod10g0145 194 Gene3D - 131 150 IPR023214 -
Dod10g0145 194 PANTHER ATP7, ISOFORM B 54 192 - -
Dod10g0145 194 ProSitePatterns E1-E2 ATPases phosphorylation site. 142 148 IPR018303 -
Dod10g0145 194 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 142 193 IPR023299 GO:0000166
Dod10g0145 194 Gene3D - 151 192 IPR023299 GO:0000166
Dod10g0145 194 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 54 192 - -
Dod10g0145 194 SUPERFAMILY Calcium ATPase, transmembrane domain M 41 132 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0145 Dod-Chr10 4687624 4689075 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0145 54 193 Primary Pumps ATPases AT1G63440 88.571 2.33e-82 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0145 K17686 - gmx:100810141 268.47