Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0143 ATGGCGAAGCTGTTAGCTTTGACATGCTTCCGCAACAAGGAGGGATGGGGTCAGTTGTCGCCGCGGCCTCACTACCCGTCGATGCCCAGGTACCCCAAGGGAGTCCGCCTGGAGAAGGCGGACTCCGAGGCGGAGAGCACGGCAGTCTTCTGCGTCGTCGGTATGACCTGCGCCGCCTGCGCCGGTTCCGTCGAGAAGGCCATCAAGCGCCTCCCCGGCATTAGCGAAGCCTTCATCGATGTCCTCAACAACCGCGCCCGAGTCCTCTTCTACCCCTCCTTCGTTAACGAGGAGACCATTCGCGAGGCCATTGAAGATTGTGGGTTTGAAGCCACGTTGCTCAAAGATGACATATGTCGCATCCAGATTAAAGGAATGACTTGCACATCATGCTCCTCCACTGTTGAATCCGCTCTGCAAGCCCTTCAAGGCGTGATCAAAGCCCAAGTGGCCTTGGCAACCTGA 465 0.5785 MAKLLALTCFRNKEGWGQLSPRPHYPSMPRYPKGVRLEKADSEAESTAVFCVVGMTCAACAGSVEKAIKRLPGISEAFIDVLNNRARVLFYPSFVNEETIREAIEDCGFEATLLKDDICRIQIKGMTCTSCSSTVESALQALQGVIKAQVALAT* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0143 154 Pfam Heavy-metal-associated domain 121 154 IPR006121 GO:0046872
Dod10g0143 154 Pfam Heavy-metal-associated domain 50 110 IPR006121 GO:0046872
Dod10g0143 154 PANTHER ATP7, ISOFORM B 16 154 - -
Dod10g0143 154 Gene3D - 119 154 - -
Dod10g0143 154 CDD HMA 121 154 IPR006121 GO:0046872
Dod10g0143 154 ProSitePatterns Heavy-metal-associated domain. 123 152 IPR017969 GO:0046872
Dod10g0143 154 CDD HMA 52 112 IPR006121 GO:0046872
Dod10g0143 154 SUPERFAMILY HMA, heavy metal-associated domain 45 115 IPR036163 GO:0046872
Dod10g0143 154 ProSitePatterns Heavy-metal-associated domain. 52 81 IPR017969 GO:0046872
Dod10g0143 154 Gene3D - 46 118 - -
Dod10g0143 154 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 16 154 - -
Dod10g0143 154 ProSiteProfiles Heavy-metal-associated domain profile. 47 113 IPR006121 GO:0046872
Dod10g0143 154 ProSiteProfiles Heavy-metal-associated domain profile. 118 154 IPR006121 GO:0046872
Dod10g0143 154 SUPERFAMILY HMA, heavy metal-associated domain 120 154 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0143 Dod-Chr10 4684562 4686570 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0143 54 154 Primary Pumps ATPases AT1G63440 27.619 1.05e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0143 K17686 - gmx:100810141 233.417