Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0142 ATGTCTTTTCTTTGGTGTTTCCTTTCACGTCTCGTTATCTTGGTGGGTTTACGAGCTGAACTAGCAGATGCTCAGTTTTACCGAAGAAATGGGCACAGACTCCTCCCTTACTGGAGAATTACAGTGGATCCATCAGGGCATGGAAACTTCTCTACCATACAATCTGCCATTGATTCAGTTCCCTCCAATAATAGGTTTTGGGTTTCCATCAATGTAAAGGCAGGAACCTACAGGGAGAAGTTGAAGATTCCTGATGACAAGCCTTACATCATACTAAAAGGAGAGGGAAGGAAGACAACAGTCGTTGACTGGGATGACCATGCTACAACCTCACAGAGCCCTACCTTCTCAACCATGGCTGACAATGTTGTCGTCAAGTTCATTAGCTTTAGGAATTCATACAATAGTCCAATGAATAGTAAACCCATTGTACCTGCAGTAGCTGCAATGGTAAGCGGCGATAAGTGTTCCTTTTATAGAGTTGGCTTCTTTGGTGTGCAAGATACGTTGTGGGATGATCAAGGAAAACATTACTACAAGCTTTGTACCATCCAAGGTGCCGTTGATTTTATCTTTGGCGCTGGCCAGTCCTTATATGAGAGATGTTCCATATCTGTTATTGGGACGTCCCTAGATCTTGGCATTCATGGTTTTATCACAGCACAAGGGAGAACAAATCAAGGCGATGCAAATGGGTTTGTGTTCAAGAATTGCAATGTCTTTGGAAATGGGAAAACTTACTTGGGAAGGCCATGGAGAGGTTATGCCAGAGTTCTTTTCTACAACACAAGCATGTCTAACATTATACTACCTAGTGGCTGGGATCCATGGAAATTCGTTGGACACGAGGATCACATAGCTTTTGCAGAGTATGGCAATTTTGGGCCTGGTTCTAACACGTACAATGCGAGTGAGTTGGACTAA 924 0.4329 MSFLWCFLSRLVILVGLRAELADAQFYRRNGHRLLPYWRITVDPSGHGNFSTIQSAIDSVPSNNRFWVSINVKAGTYREKLKIPDDKPYIILKGEGRKTTVVDWDDHATTSQSPTFSTMADNVVVKFISFRNSYNSPMNSKPIVPAVAAMVSGDKCSFYRVGFFGVQDTLWDDQGKHYYKLCTIQGAVDFIFGAGQSLYERCSISVIGTSLDLGIHGFITAQGRTNQGDANGFVFKNCNVFGNGKTYLGRPWRGYARVLFYNTSMSNIILPSGWDPWKFVGHEDHIAFAEYGNFGPGSNTYNASELD* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0142 307 Gene3D - 38 307 IPR012334 -
Dod10g0142 307 ProSitePatterns Pectinesterase signature 2. 184 193 IPR033131 -
Dod10g0142 307 PANTHER PECTINESTERASE 10-RELATED 31 301 - -
Dod10g0142 307 SUPERFAMILY Pectin lyase-like 38 302 IPR011050 -
Dod10g0142 307 Pfam Pectinesterase 40 301 IPR000070 GO:0030599|GO:0042545
Dod10g0142 307 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 31 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0142 Dod-Chr10 4669726 4681122 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0142 40 283 Carbohydrate Esterase AT2G19150 46.531 2.68e-77 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0142 - - gmx:100819252 456.062