Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0140 ATGGGTTTCTCTGGGAGCATTTCTCCTTCTTTCGCGAACCTTACTTCTTTGAGGAGGTTGCTTCTTAATGGGAACAATCTCACTGGGACTGTACCCGGTGAGCTTGTGAACTTGCCTGCTCTGACGGAGGTTGATGTTTCGAACAATAATTTGTATGGTAAGGTCCCCAAGTTTCGTGAGGGTGTGGTTGTTAACACCGGCGGGAATCCGAATATCGGAAAGGATCCGCCGCGGCAGCATGGCAGCCCAGAGAGTGGAGGGGGCTCTGGAGGGAAGAGAGGGAATGCTGGAACTATTGCTGGTGTTGTGGTTGGGGTTGTTGTTTTGCTTGGTGCAGGGGGTGTTGTGTTTGTTATGTATGGCAGGAAAAAGAAGCAGGGTGGCGGTAAGGCTCAAACTCCAAATGCAATTGTTGTGCATCCTCGTCATTCTGGGGATGGAGATGCTTTGAAGATAAGTGTTGTGGATTCTGCTGCTGCTGCTGGTTCGGGTCATGGTCATGGAGGGATTGGATCGTATAGTCCTGCAGGCAGTGATGTTCAGCATGTGGAAGCTGGTAACATGGTGATTTCGATTCAAGTTTTGAGACAGGTTACAAACAATTTCAGCGAAGAGAATATATTGGGGAAGGGTGGTTTTGGAACTGTGTACAAAGGAGAGTTGCATGATGGAACGAAGATTGCAGTGAAGAGGATGGAGTCAGGGATGGTTGGCCAGGGTGAGAAGGGGCTGACAGAGTTCAAGTCGGAAATCGCAGTGCTTACAAAGGTTAGGCACAGGCATCTGGTTGCTCTCTTGGGGCATTGCTTGGATGGAAATGAGAGGCTTCTTGTGTATGAATACATGCCTCAGGGGCCTCTTAGCAAACATCTGTTTGATTGGGAAGTTGAAGGGTTGAAGCCGCTAGAATGGAAGAGGAGGCTTGTTATTGCATTGGATGTTGCTAGAGGTGTTGAATACCTCCATGGTTTGGCACATCAAATTTTTATTCACAGGGATCTGAAGCCATCAAACATCTTGCTTGGGGATGATATGCGGGCTAAGGTATCCGACTTCGGATTGGTTCGGCTTGCTCCAGAAGGACAGACATCGTTTGAGACTAGGCTTGCTGGGACTTTTGGATATCTGGCTCCAGAGTATGCAGTCACTGGACGAGTTACAACAAAAGTTGATGTATATAGCTACGGAGTCATTCTTATGGAGATGATAACCGGAAGGAAAGCAATTGATAACAGCCAACCAGAAGAGAACATCCACCTCGTTACATGGTTCCGGAGGATGCTACTGAACAAGAATTCGATCCGGAAGCTCATAGATCCAGCGATTGATGTTGATGACGAGGAGGCCTTAGCTAGTTTTACCACTGTTGCAGAGTTGGCTAGCCACTGCTGTGCAAGGGAGCCTTATCAGCGTCCAGATATGGGTCATGTGGTGAATGTGCTGGCCCCTCTTGTTGAGATTTGGAAGCCTGCAGAAGCAAATGCTGATGACATATATGGGATTGACTTGGACATGAGCTTACCACAAGCACTCAGTAAGTGGCAGGCCTTTGAAGGAAGGAGCACCGTGGATTTATCATCATCTTCATCAATGCTTACTAGCGGAGAAAATACACAGTCAAGCATACCCACTCGGCCATCCGGATTTGCAGATTCCTTTACATCTTGTGATGGTCGATGA 1680 0.4786 MGFSGSISPSFANLTSLRRLLLNGNNLTGTVPGELVNLPALTEVDVSNNNLYGKVPKFREGVVVNTGGNPNIGKDPPRQHGSPESGGGSGGKRGNAGTIAGVVVGVVVLLGAGGVVFVMYGRKKKQGGGKAQTPNAIVVHPRHSGDGDALKISVVDSAAAAGSGHGHGGIGSYSPAGSDVQHVEAGNMVISIQVLRQVTNNFSEENILGKGGFGTVYKGELHDGTKIAVKRMESGMVGQGEKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNERLLVYEYMPQGPLSKHLFDWEVEGLKPLEWKRRLVIALDVARGVEYLHGLAHQIFIHRDLKPSNILLGDDMRAKVSDFGLVRLAPEGQTSFETRLAGTFGYLAPEYAVTGRVTTKVDVYSYGVILMEMITGRKAIDNSQPEENIHLVTWFRRMLLNKNSIRKLIDPAIDVDDEEALASFTTVAELASHCCAREPYQRPDMGHVVNVLAPLVEIWKPAEANADDIYGIDLDMSLPQALSKWQAFEGRSTVDLSSSSSMLTSGENTQSSIPTRPSGFADSFTSCDGR* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0140 559 MobiDBLite consensus disorder prediction 63 93 - -
Dod10g0140 559 CDD STKc_IRAK 208 484 - -
Dod10g0140 559 Pfam Leucine rich repeat 10 51 IPR001611 GO:0005515
Dod10g0140 559 SUPERFAMILY L domain-like 4 56 - -
Dod10g0140 559 SUPERFAMILY Protein kinase-like (PK-like) 182 489 IPR011009 -
Dod10g0140 559 Pfam Protein kinase domain 203 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0140 559 SMART serkin_6 202 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0140 559 ProSiteProfiles Protein kinase domain profile. 202 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0140 559 ProSitePatterns Protein kinases ATP-binding region signature. 208 230 IPR017441 GO:0005524
Dod10g0140 559 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED 1 559 - -
Dod10g0140 559 PANTHER OSJNBA0070M12.3 PROTEIN 1 559 - -
Dod10g0140 559 ProSitePatterns Serine/Threonine protein kinases active-site signature. 329 341 IPR008271 GO:0004672|GO:0006468
Dod10g0140 559 Gene3D Phosphorylase Kinase; domain 1 172 281 - -
Dod10g0140 559 MobiDBLite consensus disorder prediction 526 559 - -
Dod10g0140 559 Gene3D Transferase(Phosphotransferase) domain 1 282 499 - -
Dod10g0140 559 Gene3D Ribonuclease Inhibitor 1 76 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0140 Dod-Chr10 4657300 4659578 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0140 94 486 Trihelix Transcription Factor Family AT5G38560 39.801 7.13e-78 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Dod10g0140 Pkinase 9.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0140 - K00924 gmx:100776064 799.275