Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0139 ATGTCTCCATCTTCCTCTTTCTTCTTCCTCCTCCTCTGCAATTTCCTGTTCCTGTTCTTCAACCTTCCTCCCTCAATTGGCCAACAACCACAACAACAAGTGCTCTCATCCTTCAACATCTCACACTCCCCATGGCACCCAACCCAGAACAGAACCCTTGTTTCCCCCAGCTCCAACTTCACCGCTGGCTTCTTCCCCATACCCAACTCCCGAAACCTCTTCACCTTCTCCGTTTGGTTCTCCAAAGTCCCCAGAACCACAGACGCACTCGTCTGGAACGCCACCACCCCACTCAACGCCAATTCCTCCCTTATCATCACCCCCAATGGCCAGATCCTCCTCAACGGTTCCCCCTTGGCTAACAACAACGCCTCTTCCTCTTCCAACACCACACAACTCACTCTCACCGACCAGGGAAACCTGCTTTTTGGTAACTGGAGCAGCTTCAATAACCCCACCAACACAATCCTGCCCAACCAAAACATAAACGTAACTACCACTCTTGTTTCCAACAACGGCAAGTACAAGTTCGTTAATTCAACCTCTCTGATCCTCATTTCCGCCTCCGCTCAATACTACACCGCGCTGAATCCCTTCCTGAGCATGGACGATCTCGGGAAAGTGAGCATGGTGAACAACGCTTTCCTCACTTCCGATTACGGCGAGAACAACTTGAGGAAACTGGTCCTCGACGACGACGGGAATCTCAAAATCTACAGCTTCTACCAGAACCAGTGGAACGTGGTGTGGAGAGGTATATGGGAGTTTTGCAAGATCAAAGGAAGGTGCGGCGGTGCTTACGCTATCTGCGTGCCCAGTGAGGATTTGAGCACTGATACTTCGTGTGTTTGTCCATCCGGGTTCACGCGCAATGGAAGTAGTGTGGCCGAGAACGGGTGCACGAGGAAGATCCCACTCTCCAACAACACCGATTTCATAAGGCTGGATTACGTTAACTACACCAGCAACCAGATTAAACAAATCAGCGCCGAGAATTTCACGATCTGTGAATCCAGCTGCCATACACAGCCGAAATGTCTCGGGTTTGGATTCAAATACGATGGATCAGGCTACTGTGTCCTGTTACTAGGAGAAGAGCTTCTATATGGTTACTGGTCGCCAGGGACAGAAACTGCCTTGTTCTTGAAAGTTGACAAAAAGGAAAGAGAGCTCAGCAATTTCGTTGGCTTAACCGAGGTGATGCAAACAACGTGCCCAGTGAATATAAGCCTGCCGCTACCACCCAAGGACTCGAACACCACAACAAGGAACATCGCAATAATCTGCACCCTTTTCGCCGCGGAATTGATCTCCGGTGTGGCTTTCTTCTGGTCTTTCCTCAAGAGGTACATCAAGTACAGGGACATGGCCACCACGTTGGGCCTTGAGCTCTTACCCGCTGGCGGGCCAAAACGGTTCACTTATTCTGAACTCAAAGCTGCCACCAATGACTTCTCCAGCCTCATAGGGAGAGGAGGCTTCGGAGATGTCTACAGAGGCGAGCTGCCGGACCACCGCATCGTCGCCGTGAAGTGCCTCAAGAATGTCACCGGCGGCGACCGCGAGTTCTGGGCGGAGGTCACCATCATCGCCAGGATGCACCACCTCAACTTGGTTCGCTTGTGGGGGTTCTGTACTGAGAAGGGTCGGAGGATACTAGTGTATGAGTACATCCCCGGTGGGTCATTGGACAAGTACCTGTTCCGGGTTAAGAATTACAACAAAGATGATGGTGCTGCAGCTGATTCTGATCAAAACAGACAACAGAAGCCTGTTCTGGATTGGAACGTGAGGTACAGGATTGCTCTGGGTGTGGCCAGGGCCATAGCGTACTTGCATGAGGAGTGCTTGGAGTGGGTTCTCCACTGTGACATCAAGCCAGAGAACATTCTCTTAGGTGAGGACTTTTGTCCCAAGATATCGGATTTTGGGCTGGCCAAGCTGAGGAAAAAGGAGGACATGGTGACCATGTCCAGGAGGAGGGGCACTCCTGGTTACATGGCTCCTGAGTGGATCACTGCGGACCCAATCACTGCAAAGGCTGATGTGTACAGCTTTGGGATGGTGATGTTGGAGCTTGTGAGTGGGGTGAGGAACTTTGAGACGCAAGGGTCTTTGGTGCGCAGTGAGGATTGGTACTTCCCGGGTTGGGCATTTGACAAGATGTTTAAGGAGATGAGGGTGGAGGACATTCTTGATGCCCAGATTAGGCAGTTTTATGACAGCAGGGCACATTTTGAGTTGGTTAATAGGATGGTGAAAACTGCTATGTGGTGCCTTCAGGATAGGCCTGAGTTGAGGCCAACCATGGGGAAGGTGGCTAAGATGCTGGAAGGAACAGTGGAGATTATTGAGCCCAAGAAGCCCACTGTTTTCTTCCTTGGGGAAGAGTAG 2394 0.5117 MSPSSSFFFLLLCNFLFLFFNLPPSIGQQPQQQVLSSFNISHSPWHPTQNRTLVSPSSNFTAGFFPIPNSRNLFTFSVWFSKVPRTTDALVWNATTPLNANSSLIITPNGQILLNGSPLANNNASSSSNTTQLTLTDQGNLLFGNWSSFNNPTNTILPNQNINVTTTLVSNNGKYKFVNSTSLILISASAQYYTALNPFLSMDDLGKVSMVNNAFLTSDYGENNLRKLVLDDDGNLKIYSFYQNQWNVVWRGIWEFCKIKGRCGGAYAICVPSEDLSTDTSCVCPSGFTRNGSSVAENGCTRKIPLSNNTDFIRLDYVNYTSNQIKQISAENFTICESSCHTQPKCLGFGFKYDGSGYCVLLLGEELLYGYWSPGTETALFLKVDKKERELSNFVGLTEVMQTTCPVNISLPLPPKDSNTTTRNIAIICTLFAAELISGVAFFWSFLKRYIKYRDMATTLGLELLPAGGPKRFTYSELKAATNDFSSLIGRGGFGDVYRGELPDHRIVAVKCLKNVTGGDREFWAEVTIIARMHHLNLVRLWGFCTEKGRRILVYEYIPGGSLDKYLFRVKNYNKDDGAAADSDQNRQQKPVLDWNVRYRIALGVARAIAYLHEECLEWVLHCDIKPENILLGEDFCPKISDFGLAKLRKKEDMVTMSRRRGTPGYMAPEWITADPITAKADVYSFGMVMLELVSGVRNFETQGSLVRSEDWYFPGWAFDKMFKEMRVEDILDAQIRQFYDSRAHFELVNRMVKTAMWCLQDRPELRPTMGKVAKMLEGTVEIIEPKKPTVFFLGEE* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0139 797 SUPERFAMILY alpha-D-mannose-specific plant lectins 87 251 IPR036426 -
Dod10g0139 797 PIRSF SRK 3 198 IPR024171 GO:0004674
Dod10g0139 797 PIRSF SRK 179 797 IPR024171 GO:0004674
Dod10g0139 797 PANTHER OS07G0415500 PROTEIN 15 797 - -
Dod10g0139 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Dod10g0139 797 SMART serkin_6 483 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0139 797 ProSiteProfiles PAN/Apple domain profile. 300 385 IPR003609 -
Dod10g0139 797 PANTHER OS10G0101000 PROTEIN 15 797 - -
Dod10g0139 797 Gene3D Phosphorylase Kinase; domain 1 457 557 - -
Dod10g0139 797 Pfam S-locus glycoprotein domain 220 290 IPR000858 GO:0048544
Dod10g0139 797 SUPERFAMILY Protein kinase-like (PK-like) 465 778 IPR011009 -
Dod10g0139 797 Pfam Protein kinase domain 487 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0139 797 CDD STKc_IRAK 489 779 - -
Dod10g0139 797 Gene3D Transferase(Phosphotransferase) domain 1 559 788 - -
Dod10g0139 797 ProSitePatterns Protein kinases ATP-binding region signature. 489 511 IPR017441 GO:0005524
Dod10g0139 797 ProSiteProfiles Protein kinase domain profile. 483 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0139 797 Gene3D - 45 151 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0139 Dod-Chr10 4625046 4627890 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0139 398 789 Receptor kinase-like Gene Family AT4G18250 36.609 3.59e-76 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dod10g0139 Pkinase 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0139 - - gmx:100775518 1197.96