Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0137 ATGACAGCAATCACATCGAGAAAATCGAAGCGCAAGCTTCACCTGGAACCAGCACAGATCACCGGCAAAAAGCTCCGGTCAAATCTCCCTCGCCGGCGACGGCGCCAGATCTCACCGGTGCTTCTCGGTTCGACTAGACTCAACTTTCCCGAAGAAAATCCTCGTTTCTCTCGAAATTCGGGGGATTCCGGCTCTTGCTCTTACTTCGCCGGCGGCGAAGAAGCTTCGTGCAATTCGAGCAGAGCTTCCGTCGTTTTCGCCGGAAACGGAAGTATCAGCTCCAAAGTGAGCAAGAGATTACCATGCGAGCTCTCGAAAAATCGAAGATTCGAGAAGCTAAACGAAAGTGAAGTCTCGGAGTCTTCGTGCGTGGACTCCAGTGCCGGAGTTCACGAACGCAGCAGGAGCTTGATTCTGAACTTCAGGACCGGAAAAGAGAGCGAAAATCCGACAGAAAATGAGGAAATCTCCGAAGCTTGCTCGAAATCGGAGATCACTTCTTGCGAGGAGCTGTTACACGGCTGGAACTCGAAGTCCGGGAACGGAAATTTGAAAAACGACGTCGTTTCGGTTAGCTCCTTTGCTGCTCGCGCGACGTCGTTTGAGGAAGAGAAGACCGTAACCATAGGCAAGGAAAACAGAGCATCGGAATTCGAATTCTCTCAAGGCTCGAGCAGAAACCGCCGCGACGATGAGAACTGCGTTGATCTGACAGCGCAATCGACGGTCAACGAGTTGACGAATAACTCCGATCTTGCTTGCACGGAGCAATTGCAATTCTCCTACTACGACGACGAAGAAGATGAGGAATCTGAGTACTATTCGAGCCAGGGAACTTCGTTTTCTGATGAGATCTTCAGCTTCCCCGAGTGCTCGGAGCTTGAGCTTTCGGATTACACTCCGTCGCTGTTCATCGATTCCGGAAGCCAGTTCTCGCAGGGATCCGTCGGAGAAACTCCTTCCCCAACTCACTCGCTATTCCTTCAGTTCCGCAACGAGTTCTCGACGCTAATAACTTCTCCAATTGATAATAATGCTTCCAGCGTTGAAGATGATGAGTTTCCTCTCCAGGCCAAATTTGTGAGGTTCGATGATTTGGATGACGAAGAGAGCTACCATATGCTGAGAGAGAGAGAAAGGAGGCAAGTTCTTCAATGGAATTATGGTGAGAGGTATTTTTCCACCACGGAATTCGGTGACCTTGTGATTCAGCAGCGCTTGCAACTGGTTCACTGGATCGTTGAGCAATCTTATCGAAAACAGCTTCGGCAAGAGACAATGTTTCTTGCGGTCAGCCTCCTTGACCGTTTCTTGAGCAAAGGATACTTCAAAGCCAAGAGAAACCTTCAAATTGTTGGAATATCCTGCCTGACGTTAGCCACGAGGATCGAAGAAAACCAGCAATATAGCAGAGTGGGGCAAAAGAATTTTCACATTGGAAACAGTGTGTACAGTAGATGCGAGGTGGTGGCTATGGAATGGGTGGTGCAGGAGGTGCTCAAGTTCCAGTGTTTCCTGCCTACCATGTACAATTTCTTGTGGTTCTACTTAAAAGCTGCTAAAGCTGATGCAGCTGTGGAGAAGAGGGTCAAGTACCTGGCGGTGCTGGCGCTGTCAGCTCATGAGCAGCTGTGTTACTGGCCCTCAACAATCGCTGCAGCACTTGTAATCCTGGCTTGCTTAGAAGTCGATCACAATGCATCTCACAAAGTCATAGGGATCCACGTTAGATCAAAAGATGAGAACTTGCATGAATGCATGGAGAGCCTAGAGTGGCTATTACGCTATCTATGA 1794 0.4916 MTAITSRKSKRKLHLEPAQITGKKLRSNLPRRRRRQISPVLLGSTRLNFPEENPRFSRNSGDSGSCSYFAGGEEASCNSSRASVVFAGNGSISSKVSKRLPCELSKNRRFEKLNESEVSESSCVDSSAGVHERSRSLILNFRTGKESENPTENEEISEACSKSEITSCEELLHGWNSKSGNGNLKNDVVSVSSFAARATSFEEEKTVTIGKENRASEFEFSQGSSRNRRDDENCVDLTAQSTVNELTNNSDLACTEQLQFSYYDDEEDEESEYYSSQGTSFSDEIFSFPECSELELSDYTPSLFIDSGSQFSQGSVGETPSPTHSLFLQFRNEFSTLITSPIDNNASSVEDDEFPLQAKFVRFDDLDDEESYHMLRERERRQVLQWNYGERYFSTTEFGDLVIQQRLQLVHWIVEQSYRKQLRQETMFLAVSLLDRFLSKGYFKAKRNLQIVGISCLTLATRIEENQQYSRVGQKNFHIGNSVYSRCEVVAMEWVVQEVLKFQCFLPTMYNFLWFYLKAAKADAAVEKRVKYLAVLALSAHEQLCYWPSTIAAALVILACLEVDHNASHKVIGIHVRSKDENLHECMESLEWLLRYL* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0137 597 ProSitePatterns Cyclins signature. 406 437 IPR006671 -
Dod10g0137 597 MobiDBLite consensus disorder prediction 1 33 - -
Dod10g0137 597 Gene3D - 398 498 - -
Dod10g0137 597 PANTHER CYCLIN-SDS 1 588 - -
Dod10g0137 597 SUPERFAMILY Cyclin-like 365 503 IPR036915 -
Dod10g0137 597 CDD CYCLIN 506 580 IPR013763 -
Dod10g0137 597 Pfam Cyclin, N-terminal domain 401 503 IPR006671 -
Dod10g0137 597 CDD CYCLIN 406 465 IPR013763 -
Dod10g0137 597 SMART cyclin_7 411 498 IPR013763 -
Dod10g0137 597 SUPERFAMILY Cyclin-like 507 594 IPR036915 -
Dod10g0137 597 Pfam Cyclin, C-terminal domain 507 591 IPR004367 -
Dod10g0137 597 PIRSF Cyclin_A_B_D_E 91 299 IPR039361 -
Dod10g0137 597 PIRSF Cyclin_A_B_D_E 368 595 IPR039361 -
Dod10g0137 597 Gene3D - 499 596 - -
Dod10g0137 597 PANTHER CYCLINS 1 588 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0137 Dod-Chr10 4572696 4578737 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0137 400 559 Core Cell Cycle Gene Families AT1G20610 35.000 5.27e-21 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0137 K21777 - gmx:100817658 648.277