Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0100 ATGATAATTCCTCAATCCTCCGTCCTTACTCATCACTCGTTCCATAAACCCACGAAGCGCACGCAGCGGAGATTCGAATCCGATCGTTCTTCTGCTCCATTCTCAATTTTACCTCAATATTTTCTCTCAAACCAAACCCTGTTAGTTGCGTACTTCAGCTTACCCTTATACCTGTATTCTCAAAAAGTTAAATTTGGCATCAAAATGCCAGATGTTCAGGCCCTTGTGAATGATTTTGTGCATCAGCTCAAAAAACGTAAAATTGAAGGTTCTCAGGCCACAGCACAGCAGACAGCGGAGTTGCTTCGGTCTGTGATTTCGCAGCAGCGAGTGCCACACATGAACCAGGCTGCAGCTCTGATTAATGCAGTAAGGACTGTTGGAGAGCAACTTATTGCTGCAAATCCTGTTGAGCTAGCAGTGGGAAATATTGTGAGGCGTGTTTTGCACATTATAAGGGAGGAGGATCTTTCCCTTGCAACAGCTGCTATGGATGGTTTGGGACTGTCAGTCGCTAGTGATGATGATGATGATGTGGAGCGAAATGATCATCCTGGTCTATCCGCAGCTGCTGTTGCAGCTGCTGCAAGAAGCACCTTGCGTCCACCATCGCTGCAAACTCTTCTAGAGGATACACCTGATTCAGCTGCTGTTCCGCACACATCTTCCTCGGGGGGTGATTCTGAAGGGAAAAGTAGATCGGTTGACAAAGGTTCAAGGGGTCGGAAGTTGAAGCATGACGTGATTGAAACAGTTAATGAACTTATTCATGACATATCTGGTTGCTATGAAGCCATAGCTGAGCAAGCAGTGGAGCACATTCATCAAAATGAGGTAATATTGACACTAGGAAGTTCAAAAACAGTGTTGGAATTTCTCTGTGCTGCAAAGGATAAAAAGAGATCATTTAAAGTCTTTGTTGCTGAAGGTGCACCAAGATATCAGGGACATCTCCTTGCAAAAGATTTGGCTGCTAGAGGCTTACAAACCACAATAATTACAGATTCTGCCGTTTTTGCCATGATTTCCCGAGTTAACATGGTTATAGTTGGAGCTCATGCTGTCATGGCTAATGGTGGAGTTATTGCCCCAGTTGGGTTAAATATGGTTGCACTTGCAGCTCAAAGGCACGCTGTTCCGTTTGTGGTACTTTCTGGAAGTCACAAGTTGTGTCCTTTGTATCCACACAATCCTGAAGTCCTATTGAATGAACTGAGATCCCCATCTGAGCTACTTGACTTTGGGGAATTCTCAGATTGCATGGATTCTGCAAGTGGTGCTGGATCTCTCCACGTCGTTAATCCAACATTCGATTATGTGCCACCTAAACTTGTTAGTCTGTTTATTACTGACTCAGGAGGGCATAACCCATCATATATGTACCGGCTCATAGCTGATTACTACTCAGCAGATGATTTGGTGGTGAAAGGGAGGCCCACTACAGGGAGTTGA 1452 0.4477 MIIPQSSVLTHHSFHKPTKRTQRRFESDRSSAPFSILPQYFLSNQTLLVAYFSLPLYLYSQKVKFGIKMPDVQALVNDFVHQLKKRKIEGSQATAQQTAELLRSVISQQRVPHMNQAAALINAVRTVGEQLIAANPVELAVGNIVRRVLHIIREEDLSLATAAMDGLGLSVASDDDDDVERNDHPGLSAAAVAAAARSTLRPPSLQTLLEDTPDSAAVPHTSSSGGDSEGKSRSVDKGSRGRKLKHDVIETVNELIHDISGCYEAIAEQAVEHIHQNEVILTLGSSKTVLEFLCAAKDKKRSFKVFVAEGAPRYQGHLLAKDLAARGLQTTIITDSAVFAMISRVNMVIVGAHAVMANGGVIAPVGLNMVALAAQRHAVPFVVLSGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDSASGAGSLHVVNPTFDYVPPKLVSLFITDSGGHNPSYMYRLIADYYSADDLVVKGRPTTGS* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0100 483 PANTHER BNAA01G32370D PROTEIN 123 475 - -
Dod10g0100 483 MobiDBLite consensus disorder prediction 206 229 - -
Dod10g0100 483 PANTHER BNAA01G32370D PROTEIN 56 122 - -
Dod10g0100 483 MobiDBLite consensus disorder prediction 1 27 - -
Dod10g0100 483 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 123 475 - -
Dod10g0100 483 MobiDBLite consensus disorder prediction 206 243 - -
Dod10g0100 483 Gene3D - 262 467 IPR042529 -
Dod10g0100 483 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 56 122 - -
Dod10g0100 483 Pfam Initiation factor 2 subunit family 87 457 IPR000649 GO:0044237
Dod10g0100 483 SUPERFAMILY NagB/RpiA/CoA transferase-like 72 472 IPR037171 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0100 69 475 Eukaryotic Initiation Factors Gene Family AT3G07300 82.152 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0100 K03754 - gmx:100778545 736.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0100 10 3858348 3863099 Dod10g0100 10 3858348 3863099 ECH