Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0076 ATGGACCCGAAACTCCTAACCATCAACACCCTTGTCTCCAACCTCTCCTCCGGCTCCGAGCACACGCGCCTCGCCGCCCTCCGCCAGCTCCACCTCCTCTCCAACCAAGACCCCGCCGCCCGTCCCCTCATCTCCGCCGCCGGCGCAGTCCCCCTCCTCGCCGAAGCGCTCTTCTCCACCTCCCACCCCATCCAGGACAACGCCGCCGCAGCCCTCCTCAACCTCTCCATCACCGACCGCCGCCCCCTCGTCTCCTCGCGCCGCCTCCTCGACGGCCTCGCCCACCTCATCGCTCGCCACACCTCCTCCTCCTCCCCTTCCGCCGTCCAGTCCGCCGCCGCCACTCTCCACAGCCTCCTCGCCGTCGTCCCTGAATTCCGCCTCGTCGTGGGCGACAGGCCCGACATCATGCGCGCCCTGGTCGACGTCATCAGATCACCCGACTCGCCGACGAGGTCTGTAAAGGACGCTCTCAAGGCATCCTTCGGAGTAGCACTGCACCTGCCAAACCGGATTACTATGGTTCGGTTCGGCATGCTGCAAGTGCTATTCGCCATAGTGGCGAAGGAGAAAAGTAAAAAGAGTGGGATTGTGGAGCATGTCACTGCTGTAATTGCGCAAATTGCGGGGTGCGAGGAGAGCGAGGAGGCATTCCGGGCGGTTTCGGGGATTCGCGTGTTGTCGGGTTTGTTGGGCTCGGACCATGCTTCAGCGTGTAGCTTGAGGACCAAGGAGAATGCGGTTTCGGGGTTGTTGAATTTGGTGAGGTGTTGTGGGGAGGAAGCTGTTAAGGAGGTTAGAAAGAAAGCGGTTGATGAGGCCATGGATGGTATTGTGTACGTGCAGGAGCATGGTAGCCCCAAAGGGAAGAGCAAAGCTGTGGCGTTGTTGAAGGTGGTGTTTGATGGTGGAACCAGTGATAAGAATTTTGGAGACTTGTATCCAGTTGAGTCAGACTTGTGA 963 0.6012 MDPKLLTINTLVSNLSSGSEHTRLAALRQLHLLSNQDPAARPLISAAGAVPLLAEALFSTSHPIQDNAAAALLNLSITDRRPLVSSRRLLDGLAHLIARHTSSSSPSAVQSAAATLHSLLAVVPEFRLVVGDRPDIMRALVDVIRSPDSPTRSVKDALKASFGVALHLPNRITMVRFGMLQVLFAIVAKEKSKKSGIVEHVTAVIAQIAGCEESEEAFRAVSGIRVLSGLLGSDHASACSLRTKENAVSGLLNLVRCCGEEAVKEVRKKAVDEAMDGIVYVQEHGSPKGKSKAVALLKVVFDGGTSDKNFGDLYPVESDL* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0076 320 SMART arm_5 167 210 IPR000225 GO:0005515
Dod10g0076 320 SMART arm_5 37 77 IPR000225 GO:0005515
Dod10g0076 320 SMART arm_5 211 256 IPR000225 GO:0005515
Dod10g0076 320 Gene3D - 6 299 IPR011989 -
Dod10g0076 320 PANTHER U BOX DOMAIN-CONTAINING 2 305 - -
Dod10g0076 320 SUPERFAMILY ARM repeat 7 301 IPR016024 -
Dod10g0076 320 Pfam Armadillo/beta-catenin-like repeat 40 76 IPR000225 GO:0005515
Dod10g0076 320 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 2 305 - -
Dod10g0076 320 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 48 76 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0076 Dod-Chr10 3120258 3121956 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0076 8 297 U-box Gene Family AT2G23140 30.928 2.01e-22 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0076 - - gmx:100803111 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0076 10 3120258 3121956 Dod10g0076 10 3120258 3121956 ECH