Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0040 ATGGCCAACGAAAAATGTCGCACCAAGTTCATAGAGAACTCTAAGCCCTACTTTGCTATGATGGCTTTGCAGTTTGGCTATGCTGGAATGAACATTATCACTAAGGTTTCCCTCAACAGAGGCATGAACCACTATGTCCTCGTGGTTTACCGCCAAGCCTTTGCAACTGCTGTCATCGCTCCATTTGCCGTCATATTTGAAAGGAAACATCAACCGAAGATAACATTCCCAATCTTCCTGCAAATTTTCATCCTAGCTCTTCTTGGGACTGTGATTGATCAAAACTTCTACTATGCTGGGTTGAAATTCACATCCCCCACCTTCTCATGTGCAATGAGCAACATGCTTCCAGCTATGACTTTTGTGATGGCAGTTTTATGCCGGATGGAGAAGATCAACATGAAGAAATTGAGATGCCAAGCTAAGGTGGCGGGCACCATTCTGACAGTAGCTGGGGCCATGCTGATGACCTTGTACAAAGGCCCAATGGTGGAGATGGTGTGGACCAAACATGCACCTCATAGTAAAGCCAATGACACAAACACCACAAGACCCGTCAGACAGAGATTGGTTCATAGGCTCTATCTTCCTTATCATTGCCACACTTGCCTGGGCATCCCTCTTTGTTTTACAGGCACACTTCAAGGTATTGCTGTTACTGTTGTGATGGAACCCAAGCCGTCTGTGTGGACAATTGGCTGGGATATGAACTTACTTGCCGCTGCCTATGCTGGGATTGTTACATCAAGCATATCATACTACGTACAAGGGTTGGTGATTAAGAAGAAAGGGCCTGTATTCGCGACTGCATTTAGCCCTCTAATGATGATCATTGTGGCCATCATGGGCTCCTTTATCCTTGCAGAGCAGATTTATCTTGGAGGTGTAGTTGGTGCCATCCTGATTGTTATAGGCTTATACTCTGTCTTGTGGGGAAAGCATAAAGAACAAGTGGAGAACATAGTGGCAGAGGATATTCCCTTGCCAGTAAAGGGCGCTCAGGTTGATGGAAATTATGCCGCAGTCACCGATTCCAGTCACATATTTGTTGATGCAAATTCAGATCAGAAAACAGAAGCCAACAAGCTCTCTTCTGTTGTTATTAGCATGTCTATCCCTGAGCGTCCCATGAAAGATAACCAAGAAGAAAATGCTTAA 1158 0.4491 MANEKCRTKFIENSKPYFAMMALQFGYAGMNIITKVSLNRGMNHYVLVVYRQAFATAVIAPFAVIFERKHQPKITFPIFLQIFILALLGTVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVLCRMEKINMKKLRCQAKVAGTILTVAGAMLMTLYKGPMVEMVWTKHAPHSKANDTNTTRPVRQRLVHRLYLPYHCHTCLGIPLCFTGTLQGIAVTVVMEPKPSVWTIGWDMNLLAAAYAGIVTSSISYYVQGLVIKKKGPVFATAFSPLMMIIVAIMGSFILAEQIYLGGVVGAILIVIGLYSVLWGKHKEQVENIVAEDIPLPVKGAQVDGNYAAVTDSSHIFVDANSDQKTEANKLSSVVISMSIPERPMKDNQEENA* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0040 385 PANTHER WAT1-RELATED PROTEIN 204 350 IPR030184 GO:0016021|GO:0022857
Dod10g0040 385 PANTHER WAT1-RELATED PROTEIN 10 184 IPR030184 GO:0016021|GO:0022857
Dod10g0040 385 PANTHER WAT1-RELATED PROTEIN 10 184 - -
Dod10g0040 385 PANTHER WAT1-RELATED PROTEIN 204 350 - -
Dod10g0040 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
Dod10g0040 385 Pfam EamA-like transporter family 234 310 IPR000620 GO:0016020|GO:0016021
Dod10g0040 385 Pfam EamA-like transporter family 16 157 IPR000620 GO:0016020|GO:0016021
Dod10g0040 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 234 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0040 Dod-Chr10 1881249 1885466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0040 4 383 Nodulin-like Gene Family AT5G07050 57.457 2.10e-159 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0040 - - pvy:116116874 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0040 10 1881249 1885466 Dod10g0040 10 1881249 1885466 ECH