Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0038 ATGAGGAAGAAGCTAGACACCCGCTTTCCTGCTGCTCGGATAAAGAAGATAATGCAAACAGATGAGGATGTTGGAAAGATAGCACTAGCAGTTCCTGTTTTAGTGTCTAAAGCTCTAGAGCTATTTTTGCAAGATCTTTGTGACCGCACTTACGAAATAACTCTTCAGAGAGGAGCAAAGACCATGAATTCATTGCATTTAAAACATTGTGTACAAAGCTATAATGTCTTTGACTTTCTGAGAGACATCGTCAGTAGGGTTCCTGACTATAGTCATGGACATGGCCACAGCCATTCTGAGGCTGGTGCTGATGATCGTGCCCTTCCAAAGAGAAGGAAAGCTGCTGGTGATGATTGTAATGACAGTGATGAAGAGGCAAAGAGGAGTAAGATGCGTGAGTTAGGTCACACTGGCAGTAGCGGTCGGGGAAGAGGTCGAGGTAGAGGAAGAGGCCGTGGGAGAGGGGCTCGAACTGTCGAAAGAGAGACCTATCATCCGCCAGTCGAATCCGAGCCTTGTACCTCAGTTCAGCACACTACTAGCCAAGATATTCCTAATACAAGTGTGGCAATAGATAATCGTCCAGAATCCAAGGAGTTACCGCAAGAAAACACCGCCGTTTCTGAGGAAAATAATCAGTCTCTACGTAACATAGATCTGAATGCCAACTTCAATGAAGGCGAGGACAAAAACGCTGCCGGCACGGTAGCTCAGGCCTCTTTGCCTGAACCTGCTACAGAGACCAAGCATGAGGAAATCCCTGGCTGGTCCCTTTCTGATGTGGACAAGATGGCCATCGACACCATGCAGCTTTCAAGCCTTGGTGGTCGAATAGAAGAGGATGAGGATTATGATGAGGAAGGGTAA 867 0.4694 MRKKLDTRFPAARIKKIMQTDEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYNVFDFLRDIVSRVPDYSHGHGHSHSEAGADDRALPKRRKAAGDDCNDSDEEAKRSKMRELGHTGSSGRGRGRGRGRGRGRGARTVERETYHPPVESEPCTSVQHTTSQDIPNTSVAIDNRPESKELPQENTAVSEENNQSLRNIDLNANFNEGEDKNAAGTVAQASLPEPATETKHEEIPGWSLSDVDKMAIDTMQLSSLGGRIEEDEDYDEEG* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0038 288 MobiDBLite consensus disorder prediction 90 256 - -
Dod10g0038 288 MobiDBLite consensus disorder prediction 90 139 - -
Dod10g0038 288 MobiDBLite consensus disorder prediction 153 167 - -
Dod10g0038 288 SUPERFAMILY Histone-fold 4 97 IPR009072 GO:0046982
Dod10g0038 288 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 287 - -
Dod10g0038 288 MobiDBLite consensus disorder prediction 200 221 - -
Dod10g0038 288 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Dod10g0038 288 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Dod10g0038 288 PANTHER HISTONE SUPERFAMILY PROTEIN 1 287 - -
Dod10g0038 288 MobiDBLite consensus disorder prediction 170 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0038 Dod-Chr10 1676267 1685254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0038 1 278 CCAAT-HAP5 Transcription Factor Family AT3G12480 48.944 1.89e-78 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Dod10g0038 CBFD_NFYB_HMF 1.9e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0038 K21752 - gmx:100810093 431.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0038 10 1676267 1685254 Dod10g0038 10 1676267 1685254 ECH