Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0027 ATGTTCTTCTTTGCGATTATTACAGCCAAGCAGGATGGTACAAGTAAGTTAAAAACCTTGATCATCATCATTGGAAATTTCCAAGATGGCACAGAAATCGCTATTAAAAGACTCTCTAAGACATCTGGTCAAGGTCTAGAAGAGTTCAAGAACGAAGTCATCTTCATAGCCAAACTACAACATAGGAACCTTGTGAGACTATTGGGTTGTTGTGTTGAGGAAAATGAAAAACTACTTGTATATGAGTACATGCCCAATTCTAGCCTTTACTTTCACCTATTCGATGGGAAAAAACAAAAGCAACTGGATTGGAAGTTACGATTGAACATGATTAATGGCATTGCAAAAGGACTTCTATACCTTCATGAGGACTCCAGGCTTAGAATAATCCATCGAAATCTAAAAGCTAATAATGTTTTGCTAGATCAAAATATGAATCCAAAAATATCAGATTTTGGATTGGCAAGGGCATTTGAAAAAGATCAGATTTAG 492 0.3577 MFFFAIITAKQDGTSKLKTLIIIIGNFQDGTEIAIKRLSKTSGQGLEEFKNEVIFIAKLQHRNLVRLLGCCVEENEKLLVYEYMPNSSLYFHLFDGKKQKQLDWKLRLNMINGIAKGLLYLHEDSRLRIIHRNLKANNVLLDQNMNPKISDFGLARAFEKDQI* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0027 163 Gene3D Phosphorylase Kinase; domain 1 8 83 - -
Dod10g0027 163 Pfam Protein tyrosine and serine/threonine kinase 28 161 IPR001245 GO:0004672|GO:0006468
Dod10g0027 163 ProSiteProfiles Protein kinase domain profile. 1 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0027 163 PANTHER PROTEIN KINASE DOMAIN 23 163 - -
Dod10g0027 163 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 23 163 - -
Dod10g0027 163 Gene3D Transferase(Phosphotransferase) domain 1 84 163 - -
Dod10g0027 163 SUPERFAMILY Protein kinase-like (PK-like) 25 161 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0027 Dod-Chr10 1419690 1421103 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0027 25 162 Receptor kinase-like Gene Family AT4G23320 66.667 8.76e-63 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod10g0027 PK_Tyr_Ser-Thr 6.3e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0027 - - lja:Lj0g3v0351729.1 239.195