Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0023 ATGGGTGTTGAGCCATTGAATTGGTACTGCAAGCCAGACTCAAATAGTATTTGGGCTAAAGCTGTAGATAGTGCTTTTGGGTCCTATACACCTTGTGCAATCAACACCCTTGTTATCTCAATCTCCAATTTGGTTCTTATGGGCGTGTGCTTGTATCGAATATGGCTTATCGCAAGAAATGCCAAAGCTCAGAAGTTTTCTTTGAGTTCAAATTGGTATAATTATATTCTTGGAATGTTGGCTGCTTATTGTGCTGCTCAACCTTTATTGAGATTGGTAACAGGAATTTCGGCCTTCAACCTGGATGGAGAAACTGGCTTTGCTCCTTTTGAGGTAACAGCCCTGGTTGTTGAAGCACTTACTTGGTGCTCAATGGTGGTTCTCATTCTCTTGGAAACGAAGGTTTATATCCGGCAATTTAGATGGGTTGTGCGGTTTGGAGCTCTTTATGTTTTGGTGGCAGATATTGTATTGCTTAACCTTCTTCTATCAGTGAAAGATTACTGCAACAGATCTGCCTTGTTTCTGTACATTAGCACTTTTATCTGCCAGGTGTTGTTTGGTATTTTACTTCTTGTTTACATTCCTAATTTGGTTCCATATTCCGGCCATATGGTAATGCGAGATGATCTTCCTCACAATGCTGAATATGAACCACTTTGGGGGGAAGAACAAGTTTTCCCTGAGAGGCATGCCAGTGTATTCTCTAGATTATGTTTTGGATGGGTAACTCCACTCATGCAACAAGGTTACAGAAAACCTATCACAGAAAAGGATGTTTGGAAGCTTGACAAGTGGGATCAAACAGAGACATTAACAGAAAAGTTCCAAAAGTGTTGGATGTCCGAATTTCAAAGCTCTAACCCATGGCTTTTGAGAGCTTTGAACAATAGCCTCGGGAAGAGGTTTTGGTGGGGAGGCATCTATAAGATTGGTAATGATCTTTCTCAGTTTGTTGGGCCTACTTTGCTGAACCATCTATTAAATTCAATGCAAAATGGAGATCCATCTTGGATGGGCTACATCTACGCTTTCTCCATATTTGTTGGAGTGTCACTTGGTGTTCTATGTGAAGCACAGTATTTTCAGAATGTGATGCGTGTTGGTTTTCAGCTTAGATCAACTCTGGTGGCTGCTATATTTAGAAAATCTTTGAGGCTAACTAATGAAGGTCGAAAGAAATTCACATCTGGGAAGCTTATGAATATGATAACAACAGATGCCAATGCCCTACAGCAAATATGTCAACAACTCCATGGACTATGGTCAGCGCCATTCCGTATCACCATAGCTATGGTTCTCCTGTATCAGCAACTAGGTGTTGCTTCACTTATTGGAGCACTAATGCTAGTTCTCATTGTCCCACTGCAGACATACGTGATTAGCAAAATGAGGAAACTGACAAAGGAAGGACTACAGCAGACAGACAAAAGAGTTGGTCTCATGAATGAAATTTTGGCTGCCATGGACACTGTAAAATGTTATGCATGGGAAACAAGCTTTCAATCTAGAGTTCAAAGCATACGAGATGATGAGCTATCATGGTTCCGCAAAGCACAGCTACTAAATGCTCTTAATACCTTTATACTAAACAGCATCCCAGTTCTTGTGACTGTGACCACATTTGGAATGTTCACTTTACTTGGTGGAGAATTGACACCTGCAAGGGCATTTACCTCACTATCTCTATTTGCAGTCTTGCGCTTTCCATTAAATATGCTTCCAAATTTACTGAGTCAGGTAGCAAATGCAAATGTCTCATTGCAACGTTTGGAGGAATTGTTCTTGGCTGAGGAGAGAAATTTAAAACAAAATCCACCTCTTGTACCTGGACTTCCAGCCATCTCAATAAAGAATGGGTACTTTTCATGGGATCCAAAGGCTGAGAAGCCCACATTATCAAACATCAATATCGAAATACCAATTGGCAGCTTAGTTGCAATTGTTGGTGCTACTGGAGAAGGGAAAACTTCACTTATTTCAGCAATGATTGGAGAGCTACCTCTTGTATCTGATGGAAATGCTACAATTAGAGGCACTGTGGCTTATGTTCCTCAAATTTCATGGATTTACAATGCTACGGTTCGTGAAAATATATTATTCGGATCAAAATTTGAATATGAACGATACTGGAAGGCCATCAATGTTACTGCTTTGCAGCATGATCTCCACTTATTACCTGGACGCGATTTTACTGAAATTGGGGAAAGAGGAGTTAATATTAGTGGTGGACAAAAGCAGAGAGTTTCCTTAGCAAGGGCTGTATATTCAAATTCTGATGTATATATATTTGACGATCCTTTAAGTGCTCTTGATGCTCATATTGCTCATGAGGTTTTCAATAACTGTATAACGGAAGGGCTGGGAGGAAAAACTAGGGTTCTTGTCACCAACCAGCTACATTTTCTCCCTCATGTGGATAAAATTATTCTGGTTAGTGAAGGCATGATTAAGGAGCAAGGAACTTTTGAGGAGTTATCAAAATGTGGGCCTTTGTTTCAAAAACTAATGGAAAATGCGGGGAAAATGGAACAGCACTCGGATAGTAAAGAAGATAGAGATAATAATGGCAAGGATAATGTTTCAACCTCAAAAAATGAGGCAATTGTAGAGGTATCAAATGATGCAAGCTATGAGAAGAAGGGAAAATTACGTAAATCAGTACTTATTAAGCAAGAAGAGCGGGAGACAGGTGTGGTTAGCTATAAAGTTTTAATGAGGTACACATCTGCATTGGGAGGCCTGTGGGTAGTTTCCATACTCTTTGCTTGCTATATATTAACTGAAGTTCTTCGAATTTCAAGTAGCACATGGTTAAGTGTGTGGACAGATCAAGATTCCACTGCAGATTATAATCCAGGATATTTTCTTTCCATCTATGCTCTTCTCTCATTTGGGCAGGTAGCTGTGGCACTTGCAAACTCTTATTGGTTGATCATTTCGAGCCTCCGCGCTGCCAAAAGATTGCATGATGCAATGCTTGATAAAATACTTCGGGCTCCAATGTTGTTCTTCCAAACTAATCCTGTTGGCCGCATAATTAACAGATTTGCTAAAGACACGGGAGATATTGATACCAATGTCTCTAATTTGTTGAATATGTTTATGGGGCAACTTTGGCAGCTACTTTCAACCTTTGTTCTCATTGGTACTGTGAGCACAATATCCTTGTGGGCCATAATGCCACTTTTGATCTTCTTTTACGGAGCTTATATATATTACCAGACCACGGCCCGGGAGGTGAAGCGCTTGGATTCCATTACAAGATCTCCTGTTTATGCACATTTTGGAGAATCATTGAATGGTTTGTCAAGCATTCGCGCCTACAAAGCATATGAAAGGATGGCGCACATAAATGGAAAATTCATGGATAACAATATCAGATTTACCCTTGTGAATTTTAGTTCCAACCGTTGGCTCACTGTAAGGTTAGAAACATTGGGAGGCCTCATGATTTGGTTGATAGCAACGTTTGCTGTCTTGCAGAATGGAAGAGCTGAAAACCCGGCACTTTTTGCGTCTACAATGGGTTTACTTCTCAGTTATACTTTGAACATAACAACTCTCTTGAGTGGTGTCCTCAGACAAGCAAGTAGAGCTGAAAATAGTTTAAATTCTGTTGAGCGTGTTGACACGTATATAGACTTGGAAACCGAGGCTCCATGTATAATTGAGGCAAACCGTCCGCCACCAGGATGGCCAACATCAGGATCAATTGAGTTTGAGGATGTTGTCCTGAGATACAGGCCTGAACTTCCTCCAATCTTGCATGGATTGTCCTTTACAGTTCTACCAACTGAGAAGGTTGGGATAGTTGGTAGAACTGGTGCAGGAAAATCTAGCATGCTTAATGCATTATTCCGGATTGTTGAGCTACTTAAAGGAAGAATCATTATTGATGGGTTTGATATTTCTTTGTTTGGACTGGCAGATTTGCGAAGAGTTCTAACTATCATACCACAATCACCAGTTCTTTTCTCCGGAACTGTTCGTTTCAATCTTGATCCATTTAATGAACACAATGATGCTGACCTATGGGAAGCTTTAGAAAGGGCGCATTTGAAGGATGTAATAAGAAGAAACCCATTCGGCCTAGATGCTCAGGTTTCCGAGGGAGGAGACAATTTCAGTGTTGGGCAGAGACAACTACTAAGTCTAGCTAGAGCATTGCTGCGAAGATCAAAGGTACTTGTCCTGGATGAAGCTACTGCAGCTGTCGACGTTAGAACTGATGCTCTTATACAGAAAACTATCCGGCAAGAATTTCAGCATTGCACCATGCTCATCATTGCACACAGACTAAATACAGTCATTGACTGCAATCGGATTTTACTACTTGATTCTGGACGGGTTCTTGAATACGATTCGCCGGAGAACCTATTATCAAATGAAGAAAGTGCATTCTACAAGATGGTTCAGAGTACAGGATCTGCAAATGCTCAGTATTTATGTAGCCTAGTTTTTGGAAGGATTATCAATAATTCTAATGAAGAGAACAAGGTGCTGGAAAACAAAATGAGACAGTTAGCTTCAAACCAATGGGCTGTTGCTACTCAGTTTGCCTTAGCTGCTACCCTTTCTTCATTGAATCATAACCTTCAAAGCCCAACTACTGAAGACAACACAGATTTCTTGGAGAAAACAAAGAATGCAGTGACAACACTTCAGGAAGTTCTTGTAGGGAAGCACGATGACGCCATAGAGGAGTCGCTTACTAAATACAACGTTCCTACAGAAAGATGGTGGTCTACTCTCTATAAAGTAGTTGAAGGTCTTGCTGTCTTGATCAGGTTGCCTCCAGAAAGCCTTCAAGAATTAGAACTTGATTTTGAAGGGAGGGCCTTCTACTGA 4851 0.4063 MGVEPLNWYCKPDSNSIWAKAVDSAFGSYTPCAINTLVISISNLVLMGVCLYRIWLIARNAKAQKFSLSSNWYNYILGMLAAYCAAQPLLRLVTGISAFNLDGETGFAPFEVTALVVEALTWCSMVVLILLETKVYIRQFRWVVRFGALYVLVADIVLLNLLLSVKDYCNRSALFLYISTFICQVLFGILLLVYIPNLVPYSGHMVMRDDLPHNAEYEPLWGEEQVFPERHASVFSRLCFGWVTPLMQQGYRKPITEKDVWKLDKWDQTETLTEKFQKCWMSEFQSSNPWLLRALNNSLGKRFWWGGIYKIGNDLSQFVGPTLLNHLLNSMQNGDPSWMGYIYAFSIFVGVSLGVLCEAQYFQNVMRVGFQLRSTLVAAIFRKSLRLTNEGRKKFTSGKLMNMITTDANALQQICQQLHGLWSAPFRITIAMVLLYQQLGVASLIGALMLVLIVPLQTYVISKMRKLTKEGLQQTDKRVGLMNEILAAMDTVKCYAWETSFQSRVQSIRDDELSWFRKAQLLNALNTFILNSIPVLVTVTTFGMFTLLGGELTPARAFTSLSLFAVLRFPLNMLPNLLSQVANANVSLQRLEELFLAEERNLKQNPPLVPGLPAISIKNGYFSWDPKAEKPTLSNINIEIPIGSLVAIVGATGEGKTSLISAMIGELPLVSDGNATIRGTVAYVPQISWIYNATVRENILFGSKFEYERYWKAINVTALQHDLHLLPGRDFTEIGERGVNISGGQKQRVSLARAVYSNSDVYIFDDPLSALDAHIAHEVFNNCITEGLGGKTRVLVTNQLHFLPHVDKIILVSEGMIKEQGTFEELSKCGPLFQKLMENAGKMEQHSDSKEDRDNNGKDNVSTSKNEAIVEVSNDASYEKKGKLRKSVLIKQEERETGVVSYKVLMRYTSALGGLWVVSILFACYILTEVLRISSSTWLSVWTDQDSTADYNPGYFLSIYALLSFGQVAVALANSYWLIISSLRAAKRLHDAMLDKILRAPMLFFQTNPVGRIINRFAKDTGDIDTNVSNLLNMFMGQLWQLLSTFVLIGTVSTISLWAIMPLLIFFYGAYIYYQTTAREVKRLDSITRSPVYAHFGESLNGLSSIRAYKAYERMAHINGKFMDNNIRFTLVNFSSNRWLTVRLETLGGLMIWLIATFAVLQNGRAENPALFASTMGLLLSYTLNITTLLSGVLRQASRAENSLNSVERVDTYIDLETEAPCIIEANRPPPGWPTSGSIEFEDVVLRYRPELPPILHGLSFTVLPTEKVGIVGRTGAGKSSMLNALFRIVELLKGRIIIDGFDISLFGLADLRRVLTIIPQSPVLFSGTVRFNLDPFNEHNDADLWEALERAHLKDVIRRNPFGLDAQVSEGGDNFSVGQRQLLSLARALLRRSKVLVLDEATAAVDVRTDALIQKTIRQEFQHCTMLIIAHRLNTVIDCNRILLLDSGRVLEYDSPENLLSNEESAFYKMVQSTGSANAQYLCSLVFGRIINNSNEENKVLENKMRQLASNQWAVATQFALAATLSSLNHNLQSPTTEDNTDFLEKTKNAVTTLQEVLVGKHDDAIEESLTKYNVPTERWWSTLYKVVEGLAVLIRLPPESLQELELDFEGRAFY* 1617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0023 1616 MobiDBLite consensus disorder prediction 841 860 - -
Dod10g0023 1616 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 304 583 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod10g0023 1616 SMART AAA_5 642 822 IPR003593 -
Dod10g0023 1616 SMART AAA_5 1265 1458 IPR003593 -
Dod10g0023 1616 Gene3D - 1222 1475 IPR027417 -
Dod10g0023 1616 SUPERFAMILY ABC transporter transmembrane region 289 591 IPR036640 GO:0005524|GO:0016021
Dod10g0023 1616 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 609 838 IPR027417 -
Dod10g0023 1616 MobiDBLite consensus disorder prediction 841 865 - -
Dod10g0023 1616 PANTHER ABC TRANSPORTER C FAMILY MEMBER 11-RELATED 37 1494 - -
Dod10g0023 1616 CDD ABCC_MRP_domain1 615 815 - -
Dod10g0023 1616 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 615 839 IPR003439 GO:0005524
Dod10g0023 1616 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1239 1473 IPR003439 GO:0005524
Dod10g0023 1616 ProSitePatterns ABC transporters family signature. 1376 1390 IPR017871 GO:0005524
Dod10g0023 1616 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1230 1473 IPR027417 -
Dod10g0023 1616 Pfam ABC transporter 633 768 IPR003439 GO:0005524
Dod10g0023 1616 CDD ABC_6TM_ABCC_D2 918 1214 IPR044726 GO:0140359
Dod10g0023 1616 Gene3D ABC transporter type 1, transmembrane domain 880 1220 IPR036640 GO:0005524|GO:0016021
Dod10g0023 1616 Gene3D ABC transporter type 1, transmembrane domain 282 598 IPR036640 GO:0005524|GO:0016021
Dod10g0023 1616 CDD ABCC_MRP_domain2 1237 1457 - -
Dod10g0023 1616 Coils Coil 1492 1512 - -
Dod10g0023 1616 Pfam ABC transporter 1256 1404 IPR003439 GO:0005524
Dod10g0023 1616 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 37 1494 - -
Dod10g0023 1616 Coils Coil 574 594 - -
Dod10g0023 1616 CDD ABC_6TM_ABCC_D1 305 591 IPR044746 GO:0140359
Dod10g0023 1616 SUPERFAMILY ABC transporter transmembrane region 915 1219 IPR036640 GO:0005524|GO:0016021
Dod10g0023 1616 ProSitePatterns ABC transporters family signature. 741 755 IPR017871 GO:0005524
Dod10g0023 1616 Pfam ABC transporter transmembrane region 307 571 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod10g0023 1616 Pfam ABC transporter transmembrane region 920 1165 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod10g0023 1616 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 920 1202 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod10g0023 1616 Gene3D - 599 865 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0023 Dod-Chr10 1284533 1315497 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0023 615 831 Calmodulin-binding Proteins AT2G36910 28.261 3.08e-22 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0023 - K05665 gmx:100811691 2748