Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0010 ATGGAAGAAGGGTTAGGCCAAAACTCAGTTCCTCCTTCAGGTCCCATTGATAAGTCAAGGATTCTTGATGTTAAACCTATGCGTAGTTTGATTCCTGTGTTCCCAATATCTCCTCAGGCTCCATCCTCTGGGCAGTACCCTTCTGGATTTTCCCCATTTTTCCCGTTTGGTGCCCCCCAGCAAGGTTCTTCCTCTGGGGTGACACCAAGGGGTGGTGCCATACCGGCACCGATACGGGCGTATAGGAGCCCGATAGGGGCAGTAGACGCTACTACACCAACAGAGGGCTCTCGTGGCAGAAAGCATGCGGCGGCGTCGCAGTCGCGCCGCCCGAAATCATCTGCAAAGAAGAATAAGAAAGCTCAAGGGCCACCAGTTGATTCAAGTGCTCTAGTAGGTATTAGCCCAGCACAAAGAGAAGATGGTAACCGAGATGTGGTTAACCTCATACTCCTGACTTTTGATGCACTTCGTAGGAGGCTCTGCCAACTTGAAGATGCCAAGGAATTGAGCACGGGGTCTATCAAGCGCGCGGATTTGAAAGCTTGCAATACTTTGATGAGCAAAGGGATTCGGACGAACATGAGGAAGAGAGTAGGGTTAGTGCCTGGGGTTGAGATTGGGGACATTTTCTATTTCCGGATGGAATTATGTATCGTGGGTTTGCATGCTCCCTCCATGGGTGGAATTGACTCCTTGCATGTCAAGGGTGAGTTTGAGGAGGAAATTGTTGCGATAAGCATTGTTTCGTCTGGAGAGTATGATGATGATGCTGACGATAATGATGTTATAGTTTATACTGGTCAGGGTGGGAACTTCAACAAGAAAGATAAGCATGTGACAGATCAAAAGCTTGAAAGGGGTAATCTTGCTTTGGATAGAAGTTCACGACAACACAATGAGGTAAGAGTCGTCCGGGGCATAAGAGATGGTGTGAATCCGAATTCAAAAATCTATGTCTATGATGGTCTGTATAAAATCCAGGATTCATGGATTGAAAGAGCAAAATCTGGTAGTGGTGTATTTAAGTATAAGTTGGTAAGAGTGCCCGGGCAGCCTAGTGCCTTTGCAGTATGGAAATCGGTTCAGAAGTGGAAGTCTGGCTTCCCTTCGAGGACTGGGCTTATTATTGCAGACCTCTCCTCTGGGGCCGAGAGTATTCCGGTATCACTTGTCAATGATGTTGATAATGTGAAGGCACCTGCTTATTTCACCTATTTCCATTCTCTCAGACACCCAAAATCGTTCAGTTTGATGCAGCCTTCACATGGCTGCAACTGTAGTAAGTCATGTATCCCTGGTGATTTGAACTGCTCTTGCATTAGGAGAAATGATGGCGATTTTCCATATACTGGCAATAACATTCTGGTTAGTCGAAGGCAATTAATTCATGAATGTGGTCCCACATGTCAGTGTTTTCCTAACTGCAAAAATCGAGTATCCCAGACTGGTCTGAAGCACCACATGGAAGTGTTCAAAACAAAGGATAGAGGGTGGGGTCTTAGATCGCTGGATCCTATTCGTGCTGGTTCTTTTATTTGTGAGTATGCAGGGGAAGTTATTGACCAAGCCAAGTTGAATCAGCTTGTGAAGGAAGGAGATAATAACGAGTATGTTTTTGAAACAACTCGTATTTATGATCCGTTCAAGTGGAATTATGAGCCTAAGCTACTGGACGAAGTGAGTACAAATGACTCAACGGAGGATTACTTGATACCATATCCTCTAATTATAAGTGCCAAGAATGTTGGAAATGTGGCTAGATTCATGAATCATAGTTGTTCCCCAAATGTTTTCTGGCAGCCTGTCTTATATGAAGAAAACAATCAGTCGTTCCTACATGTGGCGTTTTTCGCAATCAGACACATTCCCCCAATGACAGAGTTAACATATGATTATGGAATTGCCCGTTCTGATAATGCAGGGGGTAGTAGAGATCCCAAAGGGAGAAAGAAATGCTTATGTGGGTCACCGAAATGCCATGGTTTATTTGGTTGA 1998 0.4494 MEEGLGQNSVPPSGPIDKSRILDVKPMRSLIPVFPISPQAPSSGQYPSGFSPFFPFGAPQQGSSSGVTPRGGAIPAPIRAYRSPIGAVDATTPTEGSRGRKHAAASQSRRPKSSAKKNKKAQGPPVDSSALVGISPAQREDGNRDVVNLILLTFDALRRRLCQLEDAKELSTGSIKRADLKACNTLMSKGIRTNMRKRVGLVPGVEIGDIFYFRMELCIVGLHAPSMGGIDSLHVKGEFEEEIVAISIVSSGEYDDDADDNDVIVYTGQGGNFNKKDKHVTDQKLERGNLALDRSSRQHNEVRVVRGIRDGVNPNSKIYVYDGLYKIQDSWIERAKSGSGVFKYKLVRVPGQPSAFAVWKSVQKWKSGFPSRTGLIIADLSSGAESIPVSLVNDVDNVKAPAYFTYFHSLRHPKSFSLMQPSHGCNCSKSCIPGDLNCSCIRRNDGDFPYTGNNILVSRRQLIHECGPTCQCFPNCKNRVSQTGLKHHMEVFKTKDRGWGLRSLDPIRAGSFICEYAGEVIDQAKLNQLVKEGDNNEYVFETTRIYDPFKWNYEPKLLDEVSTNDSTEDYLIPYPLIISAKNVGNVARFMNHSCSPNVFWQPVLYEENNQSFLHVAFFAIRHIPPMTELTYDYGIARSDNAGGSRDPKGRKKCLCGSPKCHGLFG* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0010 665 Gene3D - 182 367 IPR036987 -
Dod10g0010 665 SUPERFAMILY SET domain 386 662 IPR046341 -
Dod10g0010 665 MobiDBLite consensus disorder prediction 1 20 - -
Dod10g0010 665 SMART set_7 487 640 IPR001214 GO:0005515
Dod10g0010 665 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 22 665 IPR025794 GO:0016571
Dod10g0010 665 Pfam Pre-SET motif 381 479 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Dod10g0010 665 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 14 663 - -
Dod10g0010 665 SMART G9a_1 195 352 IPR003105 -
Dod10g0010 665 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH1 14 663 - -
Dod10g0010 665 ProSiteProfiles SET domain profile. 487 634 IPR001214 GO:0005515
Dod10g0010 665 ProSiteProfiles YDG domain profile. 200 348 IPR003105 -
Dod10g0010 665 MobiDBLite consensus disorder prediction 103 117 - -
Dod10g0010 665 Pfam SAD/SRA domain 199 352 IPR003105 -
Dod10g0010 665 Gene3D SET domain 370 664 IPR046341 -
Dod10g0010 665 Pfam SET domain 498 634 IPR001214 GO:0005515
Dod10g0010 665 ProSiteProfiles Post-SET domain profile. 649 665 IPR003616 -
Dod10g0010 665 SUPERFAMILY PUA domain-like 182 369 IPR015947 -
Dod10g0010 665 SMART preset_2 377 471 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Dod10g0010 665 MobiDBLite consensus disorder prediction 41 133 - -
Dod10g0010 665 ProSiteProfiles Pre-SET domain profile. 423 484 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0010 Dod-Chr10 895083 897586 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0010 6 665 Su(var)3-9 homologs AT1G73100 53.088 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dod10g0010 SAD_SRA 4.4e-49 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0010 K24405 - gmx:100812173 1086.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0010 10 895083 897586 Dod10g0010 10 895083 897586 ECH