Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod10g0006 | ATGGCTTTCTGGGGAGTGGAAGTGAAACCGGGGAAGCGCTTCACTCATGAGCACGATGATTCCAAAGGGCGCCTCCATATTTCCACTGCCACTCTGGGCTTCGGTAGTGCAACAGCAAAAAGCACACTGCAGTGTAACGTTGGCAACAGGAGCCCTGTGTATCTGTGCTCTCTGTGCCCTGGAAGGACCGAGTCCTTGCAGTTGAATCTGGAGCTCGAGGAAGATGATGAAGTCATCTTCACCGTTATTGGTCCTCGCAGCATTCATCTCTGTGGTTACTATATCGGCAGAGGAGGAGGAGGCGTTGCTCGCAATGCCAATGCCAATGACGATTCAGAAGAAACGTACGGGGAAGATATTGCCGATACAGAGACACAGAGCTCTGATGACAGTGATGAGTATGGGGGTAGTTTTATCGACGATGATCCTGTTCCGGTGGTTTTCCCGCCGTCTCCTATTTCCGATGAAGAGGAAGCTTCGCATGAAAACAGAAAGAAAGGTAGGAAAGGCAGATGCCGGCGGCTTAGGAAGAAGTACCAATCAGAAGAGTCAGATGGTGATTGGAATTTTAAGAAAAAGATAGTTGTCAATGACAATATGCATGACCAAACAAAAGAAATCGATGATGACGATAGCCTGCCAATTTCATCTGTTTATAAGAGTAAAGCCTCTCGAAGGATCTTGGACGAGGAAATGAATGATAGTGGTGACAGAGGAGCAGGTGATGCAAGCAACAAGACTGGTGAAGAAGGTGGCAATCATATTATTCAAACAGATTTAACAACTGACAATCTCCTTGTAGATAGTCACATGCACAGGGATATTGAAACATTGAAAAAGAAAAATAAAGGAAAGGGAAAAGAAATCAAGAGTTCTTTTAATGGGGATTCTATAAAGCGTGGGAACACTCTGCAAGATGAGCCAAAAATGGACAAGGTGACCCCACATCTTTTGACAGGAAATGAACAAAACCAGGAGCATGCTGATGATAGGGACATAGTCGACCCCTGCACTGCTCTGGATGCCACGGATATTGAAACATTCCAAAAGAAAAAGAGAGGGAAGGGAAAAGAAATCGAGAGTTCTTATGGGGATTCTATCAAGATTGAGAACACTGTGCAAGATGAGGCGGAAATGGACAAGGTGACCCCAGGTCTTGTAACAGGAAATGAACAAAACCAGGAGCATGCTGATGATATGGATATAGTAGATCCTTGCACTGATCTAGATGCTGGGGATACTGAAACATTCAAAGAGAAAGAGAAAGGAAAGGGAATAGAAATCAAGAGTTCTTTTAATAGGGGTTCTATCAATCTTGAGAATACTGTGCAAGATGAGCCAAAAATGGACGAAGCGACCCCTGATCTTCTGGCTGGAAATGAACAAAACCAGGAGCATGCTGACAATGAGGACACAGTGGATCCTTGCACTGTTCTGGATACTGGGCATATTGAAACATTAAAAGAGAAAAAGAAAGGCAAGGGAAAAGAAATTAAGAGTTCTTTTAATGGTGATTCTATCAAGCTTTTGAACACTGAGCAAGATGAGCCAAAAATGGATGAGGTGACCCCTGATCTGCTGACAGGAAATAAACAAAACCAGGAGCATGCTGATGATAGGGAAACTGAAACCATGGATAAAATACTACCTTCCTCTGAAATTGGTCATGAACAAGGTGAAAAACCAAAGAAGAAAAGGAAAGAACAGTCAAGGGAGGGACTACCTTTGATTGGCAGTGGTGCCCACGATAGCCATCTTGTTAATTTGCCTCAGAGAAATGAACACAAAGAACCACCCACAGTTAATAAGATTGTTAAGCTTGCAGACAATTCTGCATTGCTTCCTGTTGAAAAGGATTCTCAAAAGAGCAGAACAAAGAGGAGAAGGAAAAAACAGGTAAACAAAGGTACACATGTTGAAGGTGATACTGGATACCATGAAGATATTGTTGAAGAGTACAAAGCTAAGAGGGATAAAGCAGATTCTGATAATCTAATTCATAACTTTTCTGAAGGAAAAGAGCAACATCAGAAGCCAACAAGTGAAAAGAGTGTGGATTATGGTGCTCATGACTTCCCTGATGGAATCCAAAATGAGGAGAAAGTTAAGAAAAGGAAGAAAAAGAGTAAAAGTCAGGGGAATATTGAAGTAAATTCTGAGTTGCCTTTATCTGTTGAGCAAAGTAGTGAGATGGAGAAAGAGGATGTAAACAGGAGGGCTAATGCAAAGCAGTACCTAGTCAGAACATTTTCAAATGGACTTCTTGCTCAAGAGCTAGAAATGGGTAAAAAAGATGGCAAGATTGCTGCACCAGGGACAAAGATCAGTATTCATTTCACTGGCAAGTTAAAGGAAACTGGAGAAGTAATTGAATCAAATGCTGGCCAAGCTCCTTTCAAATTTCGCCTTGGTAAAGGAGAAGTTATAGAGTGTTGGGATGTTGGTCTCGAAGGCATGCGAGTTGGAGGAAAGAGAAGACTTGTAATCCCACCATCAATGATGTCTGAGAGTGAAGAGTACAGGGAAAAATTACCTCCAAATTCATGGATGGTTTATGACTTTGAACTGGTTAAAGTTCGTTGA | 2583 | 0.4224 | MAFWGVEVKPGKRFTHEHDDSKGRLHISTATLGFGSATAKSTLQCNVGNRSPVYLCSLCPGRTESLQLNLELEEDDEVIFTVIGPRSIHLCGYYIGRGGGGVARNANANDDSEETYGEDIADTETQSSDDSDEYGGSFIDDDPVPVVFPPSPISDEEEASHENRKKGRKGRCRRLRKKYQSEESDGDWNFKKKIVVNDNMHDQTKEIDDDDSLPISSVYKSKASRRILDEEMNDSGDRGAGDASNKTGEEGGNHIIQTDLTTDNLLVDSHMHRDIETLKKKNKGKGKEIKSSFNGDSIKRGNTLQDEPKMDKVTPHLLTGNEQNQEHADDRDIVDPCTALDATDIETFQKKKRGKGKEIESSYGDSIKIENTVQDEAEMDKVTPGLVTGNEQNQEHADDMDIVDPCTDLDAGDTETFKEKEKGKGIEIKSSFNRGSINLENTVQDEPKMDEATPDLLAGNEQNQEHADNEDTVDPCTVLDTGHIETLKEKKKGKGKEIKSSFNGDSIKLLNTEQDEPKMDEVTPDLLTGNKQNQEHADDRETETMDKILPSSEIGHEQGEKPKKKRKEQSREGLPLIGSGAHDSHLVNLPQRNEHKEPPTVNKIVKLADNSALLPVEKDSQKSRTKRRRKKQVNKGTHVEGDTGYHEDIVEEYKAKRDKADSDNLIHNFSEGKEQHQKPTSEKSVDYGAHDFPDGIQNEEKVKKRKKKSKSQGNIEVNSELPLSVEQSSEMEKEDVNRRANAKQYLVRTFSNGLLAQELEMGKKDGKIAAPGTKISIHFTGKLKETGEVIESNAGQAPFKFRLGKGEVIECWDVGLEGMRVGGKRRLVIPPSMMSESEEYREKLPPNSWMVYDFELVKVR* | 861 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod10g0006 | 860 | MobiDBLite | consensus disorder prediction | 277 | 310 | - | - | |
| Dod10g0006 | 860 | MobiDBLite | consensus disorder prediction | 105 | 178 | - | - | |
| Dod10g0006 | 860 | MobiDBLite | consensus disorder prediction | 588 | 602 | - | - | |
| Dod10g0006 | 860 | MobiDBLite | consensus disorder prediction | 532 | 547 | - | - | |
| Dod10g0006 | 860 | Pfam | Nucleoplasmin-like domain | 3 | 95 | IPR041232 | - | |
| Dod10g0006 | 860 | Gene3D | - | 696 | 860 | IPR046357 | GO:0003755 | |
| Dod10g0006 | 860 | MobiDBLite | consensus disorder prediction | 553 | 572 | - | - | |
| Dod10g0006 | 860 | MobiDBLite | consensus disorder prediction | 635 | 702 | - | - | |
| Dod10g0006 | 860 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 772 | 860 | IPR001179 | GO:0003755 | |
| Dod10g0006 | 860 | MobiDBLite | consensus disorder prediction | 277 | 294 | - | - | |
| Dod10g0006 | 860 | MobiDBLite | consensus disorder prediction | 437 | 732 | - | - | |
| Dod10g0006 | 860 | MobiDBLite | consensus disorder prediction | 483 | 501 | - | - | |
| Dod10g0006 | 860 | Gene3D | Nucleoplasmin core domain | 1 | 98 | - | - | |
| Dod10g0006 | 860 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 1 | 859 | - | - | |
| Dod10g0006 | 860 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 768 | 857 | IPR001179 | GO:0003755 | |
| Dod10g0006 | 860 | MobiDBLite | consensus disorder prediction | 112 | 137 | - | - | |
| Dod10g0006 | 860 | PANTHER | FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA | 1 | 859 | - | - | |
| Dod10g0006 | 860 | SUPERFAMILY | FKBP-like | 731 | 859 | - | - | |
| Dod10g0006 | 860 | MobiDBLite | consensus disorder prediction | 224 | 257 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dod10g0006 | Dod-Chr10 | 581561 | 588318 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dod10g0006 | 772 | 860 | Calmodulin-binding Proteins | AT5G48570 | 33.708 | 1.14e-10 | 63.2 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dod10g0006 | K14826 | - | gmx:100798135 | 372.474 |