Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0006 ATGGCTTTCTGGGGAGTGGAAGTGAAACCGGGGAAGCGCTTCACTCATGAGCACGATGATTCCAAAGGGCGCCTCCATATTTCCACTGCCACTCTGGGCTTCGGTAGTGCAACAGCAAAAAGCACACTGCAGTGTAACGTTGGCAACAGGAGCCCTGTGTATCTGTGCTCTCTGTGCCCTGGAAGGACCGAGTCCTTGCAGTTGAATCTGGAGCTCGAGGAAGATGATGAAGTCATCTTCACCGTTATTGGTCCTCGCAGCATTCATCTCTGTGGTTACTATATCGGCAGAGGAGGAGGAGGCGTTGCTCGCAATGCCAATGCCAATGACGATTCAGAAGAAACGTACGGGGAAGATATTGCCGATACAGAGACACAGAGCTCTGATGACAGTGATGAGTATGGGGGTAGTTTTATCGACGATGATCCTGTTCCGGTGGTTTTCCCGCCGTCTCCTATTTCCGATGAAGAGGAAGCTTCGCATGAAAACAGAAAGAAAGGTAGGAAAGGCAGATGCCGGCGGCTTAGGAAGAAGTACCAATCAGAAGAGTCAGATGGTGATTGGAATTTTAAGAAAAAGATAGTTGTCAATGACAATATGCATGACCAAACAAAAGAAATCGATGATGACGATAGCCTGCCAATTTCATCTGTTTATAAGAGTAAAGCCTCTCGAAGGATCTTGGACGAGGAAATGAATGATAGTGGTGACAGAGGAGCAGGTGATGCAAGCAACAAGACTGGTGAAGAAGGTGGCAATCATATTATTCAAACAGATTTAACAACTGACAATCTCCTTGTAGATAGTCACATGCACAGGGATATTGAAACATTGAAAAAGAAAAATAAAGGAAAGGGAAAAGAAATCAAGAGTTCTTTTAATGGGGATTCTATAAAGCGTGGGAACACTCTGCAAGATGAGCCAAAAATGGACAAGGTGACCCCACATCTTTTGACAGGAAATGAACAAAACCAGGAGCATGCTGATGATAGGGACATAGTCGACCCCTGCACTGCTCTGGATGCCACGGATATTGAAACATTCCAAAAGAAAAAGAGAGGGAAGGGAAAAGAAATCGAGAGTTCTTATGGGGATTCTATCAAGATTGAGAACACTGTGCAAGATGAGGCGGAAATGGACAAGGTGACCCCAGGTCTTGTAACAGGAAATGAACAAAACCAGGAGCATGCTGATGATATGGATATAGTAGATCCTTGCACTGATCTAGATGCTGGGGATACTGAAACATTCAAAGAGAAAGAGAAAGGAAAGGGAATAGAAATCAAGAGTTCTTTTAATAGGGGTTCTATCAATCTTGAGAATACTGTGCAAGATGAGCCAAAAATGGACGAAGCGACCCCTGATCTTCTGGCTGGAAATGAACAAAACCAGGAGCATGCTGACAATGAGGACACAGTGGATCCTTGCACTGTTCTGGATACTGGGCATATTGAAACATTAAAAGAGAAAAAGAAAGGCAAGGGAAAAGAAATTAAGAGTTCTTTTAATGGTGATTCTATCAAGCTTTTGAACACTGAGCAAGATGAGCCAAAAATGGATGAGGTGACCCCTGATCTGCTGACAGGAAATAAACAAAACCAGGAGCATGCTGATGATAGGGAAACTGAAACCATGGATAAAATACTACCTTCCTCTGAAATTGGTCATGAACAAGGTGAAAAACCAAAGAAGAAAAGGAAAGAACAGTCAAGGGAGGGACTACCTTTGATTGGCAGTGGTGCCCACGATAGCCATCTTGTTAATTTGCCTCAGAGAAATGAACACAAAGAACCACCCACAGTTAATAAGATTGTTAAGCTTGCAGACAATTCTGCATTGCTTCCTGTTGAAAAGGATTCTCAAAAGAGCAGAACAAAGAGGAGAAGGAAAAAACAGGTAAACAAAGGTACACATGTTGAAGGTGATACTGGATACCATGAAGATATTGTTGAAGAGTACAAAGCTAAGAGGGATAAAGCAGATTCTGATAATCTAATTCATAACTTTTCTGAAGGAAAAGAGCAACATCAGAAGCCAACAAGTGAAAAGAGTGTGGATTATGGTGCTCATGACTTCCCTGATGGAATCCAAAATGAGGAGAAAGTTAAGAAAAGGAAGAAAAAGAGTAAAAGTCAGGGGAATATTGAAGTAAATTCTGAGTTGCCTTTATCTGTTGAGCAAAGTAGTGAGATGGAGAAAGAGGATGTAAACAGGAGGGCTAATGCAAAGCAGTACCTAGTCAGAACATTTTCAAATGGACTTCTTGCTCAAGAGCTAGAAATGGGTAAAAAAGATGGCAAGATTGCTGCACCAGGGACAAAGATCAGTATTCATTTCACTGGCAAGTTAAAGGAAACTGGAGAAGTAATTGAATCAAATGCTGGCCAAGCTCCTTTCAAATTTCGCCTTGGTAAAGGAGAAGTTATAGAGTGTTGGGATGTTGGTCTCGAAGGCATGCGAGTTGGAGGAAAGAGAAGACTTGTAATCCCACCATCAATGATGTCTGAGAGTGAAGAGTACAGGGAAAAATTACCTCCAAATTCATGGATGGTTTATGACTTTGAACTGGTTAAAGTTCGTTGA 2583 0.4224 MAFWGVEVKPGKRFTHEHDDSKGRLHISTATLGFGSATAKSTLQCNVGNRSPVYLCSLCPGRTESLQLNLELEEDDEVIFTVIGPRSIHLCGYYIGRGGGGVARNANANDDSEETYGEDIADTETQSSDDSDEYGGSFIDDDPVPVVFPPSPISDEEEASHENRKKGRKGRCRRLRKKYQSEESDGDWNFKKKIVVNDNMHDQTKEIDDDDSLPISSVYKSKASRRILDEEMNDSGDRGAGDASNKTGEEGGNHIIQTDLTTDNLLVDSHMHRDIETLKKKNKGKGKEIKSSFNGDSIKRGNTLQDEPKMDKVTPHLLTGNEQNQEHADDRDIVDPCTALDATDIETFQKKKRGKGKEIESSYGDSIKIENTVQDEAEMDKVTPGLVTGNEQNQEHADDMDIVDPCTDLDAGDTETFKEKEKGKGIEIKSSFNRGSINLENTVQDEPKMDEATPDLLAGNEQNQEHADNEDTVDPCTVLDTGHIETLKEKKKGKGKEIKSSFNGDSIKLLNTEQDEPKMDEVTPDLLTGNKQNQEHADDRETETMDKILPSSEIGHEQGEKPKKKRKEQSREGLPLIGSGAHDSHLVNLPQRNEHKEPPTVNKIVKLADNSALLPVEKDSQKSRTKRRRKKQVNKGTHVEGDTGYHEDIVEEYKAKRDKADSDNLIHNFSEGKEQHQKPTSEKSVDYGAHDFPDGIQNEEKVKKRKKKSKSQGNIEVNSELPLSVEQSSEMEKEDVNRRANAKQYLVRTFSNGLLAQELEMGKKDGKIAAPGTKISIHFTGKLKETGEVIESNAGQAPFKFRLGKGEVIECWDVGLEGMRVGGKRRLVIPPSMMSESEEYREKLPPNSWMVYDFELVKVR* 861
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0006 860 MobiDBLite consensus disorder prediction 277 310 - -
Dod10g0006 860 MobiDBLite consensus disorder prediction 105 178 - -
Dod10g0006 860 MobiDBLite consensus disorder prediction 588 602 - -
Dod10g0006 860 MobiDBLite consensus disorder prediction 532 547 - -
Dod10g0006 860 Pfam Nucleoplasmin-like domain 3 95 IPR041232 -
Dod10g0006 860 Gene3D - 696 860 IPR046357 GO:0003755
Dod10g0006 860 MobiDBLite consensus disorder prediction 553 572 - -
Dod10g0006 860 MobiDBLite consensus disorder prediction 635 702 - -
Dod10g0006 860 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 772 860 IPR001179 GO:0003755
Dod10g0006 860 MobiDBLite consensus disorder prediction 277 294 - -
Dod10g0006 860 MobiDBLite consensus disorder prediction 437 732 - -
Dod10g0006 860 MobiDBLite consensus disorder prediction 483 501 - -
Dod10g0006 860 Gene3D Nucleoplasmin core domain 1 98 - -
Dod10g0006 860 PANTHER PEPTIDYLPROLYL ISOMERASE 1 859 - -
Dod10g0006 860 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 768 857 IPR001179 GO:0003755
Dod10g0006 860 MobiDBLite consensus disorder prediction 112 137 - -
Dod10g0006 860 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 1 859 - -
Dod10g0006 860 SUPERFAMILY FKBP-like 731 859 - -
Dod10g0006 860 MobiDBLite consensus disorder prediction 224 257 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dod10g0006 Dod-Chr10 581561 588318 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0006 772 860 Calmodulin-binding Proteins AT5G48570 33.708 1.14e-10 63.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0006 K14826 - gmx:100798135 372.474