Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0004 ATGGGGTCTCAAGGTGTTGGTGAGAGTAATGGTAAACATTCACAACTCCAGCCTTTGGTGCGGCAAAACTCGATGTATAGTCTCACACTTGATGAGGTTCAGAATCAGTTAGGTGACTTAGGAAAGCCACTAAGTAGTATGAACCTTGATGAGCTTCTGAAAAACATTTGGACTGCTGAGGCAAATCAGTCCATAGGTATGGACATTGAGGGCACAGCACAAACTAATCAAGCCGCACTACAGTGTCAGGCTAGTCTGTCATTAACTGGCGTACTAGGAAAGAAGACAGTTGATGAGGTTTGGAGAGATATCCAGCAAAGCAAAGATAACAAGGAGAAGAAGTCTCGAGAGAGACAGGCTACGTTGGGGGAGATGACATTGGAGGATTTCTTGGTGAAAGCAGGGGTTGTTGCTGATGCATCTAGTAATAGTAAAAACACAGGTCCTGTAGCTGGTGTTGATTCAAATGTAGCAGCACCAGAGTTTCCTCCACAAGGTCCATGGATACAGTATCCACAACCACAATATCAACATCCACAACAAAGTATAATGGGGATGTATATGCCTAGCCAGAATATCGCACAGCCATTGCACATGGGGGCTGGTGTGGCCTTGGATGTTCCATATGCTGATGGTCAGGTGGCATTGCCTTCTCCTTTGATGGGAACATTGTCAGATACAAAGACACCTGGGAGAAAAAGGGGCACACCAGAGGACATGATTGAGAAGACTGTTGAGAGGAGGCAGAAGAGGATGATCAAGAATCGAGAATCTGCTGCCCGTTCAAGAGCAAGGAAACAGGCATACACAACTGAGTTGGAGAATAAAGTCTCGCGCCTGGAAGAGGAAAATGAAAAGCTGAGGAAACGGAAGGAGCTAGAGGACATGTTGTCCTGTGCACCACCACCTCCTCAACCTAGATATCAGATTCGCCGGACAACATCCGCATCATTCTGA 957 0.4629 MGSQGVGESNGKHSQLQPLVRQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNIWTAEANQSIGMDIEGTAQTNQAALQCQASLSLTGVLGKKTVDEVWRDIQQSKDNKEKKSRERQATLGEMTLEDFLVKAGVVADASSNSKNTGPVAGVDSNVAAPEFPPQGPWIQYPQPQYQHPQQSIMGMYMPSQNIAQPLHMGAGVALDVPYADGQVALPSPLMGTLSDTKTPGRKRGTPEDMIEKTVERRQKRMIKNRESAARSRARKQAYTTELENKVSRLEEENEKLRKRKELEDMLSCAPPPPQPRYQIRRTTSASF* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0004 318 MobiDBLite consensus disorder prediction 275 318 - -
Dod10g0004 318 CDD bZIP_plant_BZIP46 247 293 - -
Dod10g0004 318 SUPERFAMILY Leucine zipper domain 247 292 IPR046347 GO:0003700|GO:0006355
Dod10g0004 318 SMART brlzneu 243 299 IPR004827 GO:0003700|GO:0006355
Dod10g0004 318 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 250 265 IPR004827 GO:0003700|GO:0006355
Dod10g0004 318 MobiDBLite consensus disorder prediction 275 296 - -
Dod10g0004 318 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 245 290 IPR004827 GO:0003700|GO:0006355
Dod10g0004 318 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 316 IPR043452 GO:0003700|GO:0045893
Dod10g0004 318 Pfam bZIP transcription factor 247 293 IPR004827 GO:0003700|GO:0006355
Dod10g0004 318 PANTHER BZIP TRANSCRIPTION FACTOR 2 316 - -
Dod10g0004 318 Gene3D - 245 299 - -
Dod10g0004 318 Coils Coil 263 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0004 Dod-Chr10 182558 191931 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0004 17 318 bZIP Transcription Factor Family AT3G56850 54.545 3.18e-92 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod10g0004 bZIP_1 1.2e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0004 K14432 - gmx:100784924 478.789