Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0001 ATGATGGGTTCTAAGAGGCCACTTCTGATACCGTCTCCAAGGACGCCCAATACCGAAGAGCTTCCAACCATTCCGGTTTTCCGCGAACTGCCTAAGTCAAAGTCAAGCTCCAGCACCGCCGTGACGTTCTCTAAGATGGACTCCACCAACCCCGTTGAGAACTCCCGCAACAGCTCATCGTCACGCAGAGGCGCCACGCCCATCCACTCTGGGAGCTCTGGCAGGAGCAGCTCCTCCGTGAAGGAAGTGAGTTTCAGCCGTTCGGCATCCAAGCCCGTTCGGTACGGCTCAAAGGGTGCTGACTCTGAAGGACTCAGCATGTCCCAGAAAGAACTCAGAGACGAGGACGCAAGGTTGGTTTATATAGATGACCCTGACAAGACCAACGAGAGTTTCCAATTTGCAGGGAACTCAATTCGCACTGCGAAATACTCCGTCCTCACTTTTGTTCCCAGGAATCTGTTTGAGCAGTTCCACAGAGTCGCTTACATTTATTTTCTTGTAATTGCGATTCTCAACCAACTCCCTCAGCTTGCAGTGTTTGGGAGGGGTGTTTCTATCCTGCCGCTGGCCTTCGTCCTGCTTGTTACAGCTGTGAAGGATGCTTTTGAGGATTGGAGGCGGCACCGGTCCGACAAAGTAGAGAACAACAGGCTAGCATCAGTTTTGGTCAATGATAAATTCGTTGAGAAGAAATGGAAGGATGTAAGAGTTGGGGAGATTGTTAAAATCAGTGCGAATGAGACCATTCCGTGTGATATTGTGTTGCTCTCAACTAGTGACCCAACCGGGGTTGCGTATGTGCAGACTATTAATCTGGACGGAGAGTCGAATTTGAAGACCAGGTACGCAAAACAAGAGACGCACTCCAAGTTGCCTGACAAGGAGAGGTTTAACGGGTTAATTAAGTGTGAGAAGCCCAATAGGAACATATATGGGTTTCAGGCTAACATGGAAATTGAGGGGAAGAAGTTGTCGCTTGGATCGTCCAACATTGTCCTTCGAGGATGTGAAATTAAGAACACCAGTTGGGCGCTCGGTGTTGCTGTGTATTGTGGCAGTGAGACCAAAGTAATGCTCAACAGCTCTGGAGCTCCATCCAAGAGGAGCCGGCTCGAGACTCGAATGAACTCTGAGATCATCATGCTGTCTTTCTTCCTTGTGGCTTTGTGTACAGTTACCTCGGTTTGTGCTGCTGTTTGGTTGAAGCGCCACAAGGATGAATTGGGTTTGTTGCCATATTACAGGAAACTGGATGTTTCGGAGGGGAAAATAGAAAGCTACAAATATTATGGATGGGGGCTGGAAGTATTCTTCACGTTCCTCATGTCAGTTATAGTGTTCCAGGTTATGATTCCCATATCCTTGTACATTTCTATGGAGCTTGTCCGCGTTGGTCAGGCCTACTTCATGATCCGAGACGACAGAATGTATGATGAGGCAACCAAGTCAAGATTTCAGTGCAGGGCTTTAAATATTAATGAAGATTTGGGGCAAATTAAGTATGTCTTCTCAGACAAAACTGGTACACTTACTGAAAACAAGATGGAGTTTCAATGTGCGAGCATCTGGGGGGTTGATTACAGTTCTACAAAAGCCAGCCTGGAGAATGATCAAGCCGAATGCTTTGTGCAAGATGGAAAGGTCTTGAGACCAAAGATGAAGGTGAAGGTTAACCCAGAGCTTTTGCATTTGTTAAGAAGTGGACTTGAAAATAAGGAGGGAAAACGGATTTATGATTTCTTTCTAGCCCTGGCAGCCTGCAATACTATTGTGCCTATTGTTGTTGACACACATGATCCTGATGTCAAGCTGATAGATTACCAAGGGGAATCACCAGATGAACAAGCATTGGCATATGCAGCTGCTGCCTATGGTTTTATGCTTATAGAACGAACCTCAGGCCATGTTGTCATTGACATTCAGGGAGAAAGACACAGGTTCAATGTCTTGGGATTGCATGAATTTGATAGTGATCGGAAGAGGATGTCGGTTATATTGGGGTACCCCGACAATTCAGTGAAACTTTTTGTTAAAGGGGCAGATACATCTATGATGAGCGTGATTTATAAATCATTTAACATGGACATAATACAAGCAACAAAAACCCATATTCACTCATATTCCTCGCTCGGTTTAAGAACACTCGTTGTTGGGATGAGGGAATTGAACGCTTCAGAGTTTGAGCAATGGCATGCTGCCTTTGAGGCAGCAAGCACTGCTTTGTTAGGTAGGGCTGCCATGCTCCGCAAGGTTGCGAGCAATGTAGAGAGCAATCTCTGCATCTTAGGTGCATCTGCTATTGAAGATAAACTGCAGCGAGGTGTGCCGGAAGCTATTGAGTCTCTAAGGACTGCAGGTATTAAAGTGTGGGTGTTGACTGGAGACAAACAGGAAACTGCTATATCAATTGGCTACTCCTCGAAGCTGCTAACAGGCAGCATGACTCAAATTATAATCAATAGCAACAATAGAGAGTCGTGTAGAAAGAGTTTGCAAGATGCCATTGATATGTTTAGAAAACTCATGTCCATGTCTGGGGTTACAAACAATACCGGAGGAAGTTCTGATGCACTTACAACTCCGACAGCCTTGATTATTGACGGTACCAGCCTTGTATATATCCTTGACAGTGAACAAGAGGAGCAGTTATTTCAACTTGCAAGAAAATGTTCTGTTGTTCTCTGTTGTCGAGTGGCACCACTGCAAAAGGCTGGGATAGTTGCCCTTGTGAAGAATAGGACAGCCGACATGACACTTGCCATTGGAGATGGTGCTAATGATGTCTCAATGATCCAAATGGCTGATGTTGGAGTTGGCATCAGTGGACAAGAGGGTCGTCAAGCTGTAATGGCGTCAGATTTTGCTATGGGTCAGTTTAGGTTTTTAGTTCCTCTCTTATTGATGCATGGGCACTGGAATTACCAACGGCTGGGTTACATGATACTGTACAACTTCTACAGAAATGCTGTCCTTGTTCTAGTCCTATTTTGGTATGTGCTCTTCACTGCCTTCACTTTAACAACTGCCATAAATGAATGGAGCACCACGTTGTATTCCATAATATACAGTTCACTGCCAACTATCATTGTTGGAATTCTTGACAAGGATCTTGGTAAAAGGACTCTCCTCAAGTGTCCTCAGCTTTACGGGGCTGGGCAGAGAGAAGAGGCCTACAACAAGAAATTGTTTCTCTTGACAATGCTTGACACTCTGTGGCAAAGCATGACAATCTTCTGGGCTCCCCTTTTTGCGTATTGGAGCAGTACTGTTGATGTGGCAAGCATAGGAGATCTCTGGACCCTTGCAGTGGTCATTTTGGTTAATTTACACTTGGCCATGGATGTTGCCAGGTGGAATTGGTTGACTCACGTTTCCATTTGGGGTTCCATCGTTGCAACTTTCATTAGTGTAATGATCCTTGATGCTATACCCACGCTCCCTGGTTACTGGGCCTTCTTTCATGCTGCACGCACTGGATTGTTCTGGCTGTGTTTGCTCGGAATCGTGATAACAGCATTGCTTCCTCGTTTTCTTTTAAAATTTATTTGTCAATATTATTTCCCAAATGATATTCAGATCTCTAGGGAAGCAGAGAAGATCGAGACTCTCAGAGATTTTGAAGGTGGACAGATAGAAATGCTCCCTATATCGGATGTTCCACCAAGATGA 3672 0.4526 MMGSKRPLLIPSPRTPNTEELPTIPVFRELPKSKSSSSTAVTFSKMDSTNPVENSRNSSSSRRGATPIHSGSSGRSSSSVKEVSFSRSASKPVRYGSKGADSEGLSMSQKELRDEDARLVYIDDPDKTNESFQFAGNSIRTAKYSVLTFVPRNLFEQFHRVAYIYFLVIAILNQLPQLAVFGRGVSILPLAFVLLVTAVKDAFEDWRRHRSDKVENNRLASVLVNDKFVEKKWKDVRVGEIVKISANETIPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETHSKLPDKERFNGLIKCEKPNRNIYGFQANMEIEGKKLSLGSSNIVLRGCEIKNTSWALGVAVYCGSETKVMLNSSGAPSKRSRLETRMNSEIIMLSFFLVALCTVTSVCAAVWLKRHKDELGLLPYYRKLDVSEGKIESYKYYGWGLEVFFTFLMSVIVFQVMIPISLYISMELVRVGQAYFMIRDDRMYDEATKSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSSTKASLENDQAECFVQDGKVLRPKMKVKVNPELLHLLRSGLENKEGKRIYDFFLALAACNTIVPIVVDTHDPDVKLIDYQGESPDEQALAYAAAAYGFMLIERTSGHVVIDIQGERHRFNVLGLHEFDSDRKRMSVILGYPDNSVKLFVKGADTSMMSVIYKSFNMDIIQATKTHIHSYSSLGLRTLVVGMRELNASEFEQWHAAFEAASTALLGRAAMLRKVASNVESNLCILGASAIEDKLQRGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTGSMTQIIINSNNRESCRKSLQDAIDMFRKLMSMSGVTNNTGGSSDALTTPTALIIDGTSLVYILDSEQEEQLFQLARKCSVVLCCRVAPLQKAGIVALVKNRTADMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLMHGHWNYQRLGYMILYNFYRNAVLVLVLFWYVLFTAFTLTTAINEWSTTLYSIIYSSLPTIIVGILDKDLGKRTLLKCPQLYGAGQREEAYNKKLFLLTMLDTLWQSMTIFWAPLFAYWSSTVDVASIGDLWTLAVVILVNLHLAMDVARWNWLTHVSIWGSIVATFISVMILDAIPTLPGYWAFFHAARTGLFWLCLLGIVITALLPRFLLKFICQYYFPNDIQISREAEKIETLRDFEGGQIEMLPISDVPPR* 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0001 1223 SUPERFAMILY Calcium ATPase, transmembrane domain M 134 1189 IPR023298 -
Dod10g0001 1223 SUPERFAMILY Calcium ATPase, transduction domain A 217 359 IPR008250 -
Dod10g0001 1223 SFLD p-type atpase 488 973 IPR044492 -
Dod10g0001 1223 MobiDBLite consensus disorder prediction 30 85 - -
Dod10g0001 1223 Pfam E1-E2 ATPase 220 462 - -
Dod10g0001 1223 ProSitePatterns E1-E2 ATPases phosphorylation site. 506 512 IPR018303 -
Dod10g0001 1223 Gene3D - 608 742 IPR023299 GO:0000166
Dod10g0001 1223 CDD P-type_ATPase_APLT_Dnf-like 136 1082 - -
Dod10g0001 1223 Gene3D - 759 962 IPR023214 -
Dod10g0001 1223 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 436 525 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod10g0001 1223 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 893 1008 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod10g0001 1223 Pfam Phospholipid-translocating ATPase N-terminal 120 185 IPR032631 -
Dod10g0001 1223 PRINTS P-type cation-transporting ATPase superfamily signature 922 941 - -
Dod10g0001 1223 PRINTS P-type cation-transporting ATPase superfamily signature 504 518 - -
Dod10g0001 1223 PRINTS P-type cation-transporting ATPase superfamily signature 804 814 - -
Dod10g0001 1223 Pfam Phospholipid-translocating P-type ATPase C-terminal 950 1190 IPR032630 -
Dod10g0001 1223 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 510 775 IPR023299 GO:0000166
Dod10g0001 1223 Pfam Cation transport ATPase (P-type) 611 685 - -
Dod10g0001 1223 Gene3D - 193 361 - -
Dod10g0001 1223 SFLD C1.7: P-type atpase like 488 973 - -
Dod10g0001 1223 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 134 1197 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Dod10g0001 1223 SUPERFAMILY HAD-like 491 963 IPR036412 -
Dod10g0001 1223 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9 1223 - -
Dod10g0001 1223 MobiDBLite consensus disorder prediction 1 85 - -
Dod10g0001 1223 MobiDBLite consensus disorder prediction 90 109 - -
Dod10g0001 1223 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 9 1223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0001 Dod-Chr10 61518 67186 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0001 76 1223 Primary Pumps ATPases AT5G04930 70.634 0.0 1724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0001 K14802 - gmx:100813982 1913.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0001 10 61518 67186 Dod10g0001 10 61518 67186 ECH