Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2535 ATGAACATATTGACAACCATATTTTTGAGGTGGGACAGTCAAAAGATTACCATCCCTAACAATGTCCTTGCTACTAAGGCTATATATAATTATTATCGAAGTCCTGACATGCTAGATGAAGTTGAGTTCTGTATACATATCACTACCCCACCTGAGAAGATTCAACTCATGAGACAAAGAATAGTCAGTTACATTGATAACAAGAAGGAGCATGGGTATCTGTCACCTATGATAATCTTTAAGGATCATGATCAATTAAGCAATGTAAAAATGCTGGTTGTCCCAATGTATAGAATGAACCACCAAGACATGGGAGAAAGATACGAGAGGAGATCCCTTTTGATTGAGGAGATGATCAAGATTTTTTGTGATCTTGACATCGAGTACCGTCTCCATCCCCTCGATGTTAGCATTAGAAGCATGCCTACTACTTCTGATCGGCTTCCACCCAGTTGGGCCACAACAAGTTGA 471 0.3949 MNILTTIFLRWDSQKITIPNNVLATKAIYNYYRSPDMLDEVEFCIHITTPPEKIQLMRQRIVSYIDNKKEHGYLSPMIIFKDHDQLSNVKMLVVPMYRMNHQDMGERYERRSLLIEEMIKIFCDLDIEYRLHPLDVSIRSMPTTSDRLPPSWATTS* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2535 156 Pfam Mechanosensitive ion channel 1 127 IPR006685 GO:0016020|GO:0055085
Dod09g2535 156 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 1 154 IPR016688 -
Dod09g2535 156 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 6-RELATED 1 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2535 Dod-Chr9 46409614 46410787 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2535 1 154 Mechanosensitive Ion Channel Family AT1G78610 60.377 1.85e-64 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2535 K22048 - gmx:100789882 236.113