Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2516 ATGGTGAAGGAAGTGAGCGAAGAAGGGCAGCAGAGTCACCACCACGGGAAAGACTATGTAGACCCTCCACCAGCGCCTCTCATCGACCTCGCGGAGCTCAAGCTCTGGTCCTTCTACAGAGCGCTCGTAGCGGAGTTCACAGCCACGCTACTCTTCCTGTACGTCACCGTCGCCACCGTCATCGGCCACAAGAAGCAAACGGGCCCGTGCGACGGCGTTGGCCTCCTCGGCATTGCCTGGTCCTTTGGTGGCATGATCTTCGTCCTCGTCTACTGCACCGCTGGCATCTCCGGTGGCCACATAAACCCAGCCGTCACATTTGGCTTGTTCTTGGCTCGCAAGGTGTCCCTCATCAGGGCCATCTCTTACATGGTAGCGCAGTGCTTGGGTGCTGTTTGCGGCGCTGGCCTGGTTAAGGCCTTCATGAAGCACTCCTACAACTCCCTCGGCGGCGGTGCTAACTCCGTGTCTCCCGGCTACACCAAGGGCGCTGCTCTCGGCGCTGAGATTATTGGCACCTTTGTCCTCGTCTACACCGTTTTCTCCGCTACTGACCCCAAGAGAAGCGCCCGTGACTCCCATGTTCCCGTTTTGGCTCCGTTACCAATTGGGTTTGCTGTTTTCATGGTTCACTTGGCTACCATACCTATCACTGGTACCGGTATAAACCCCGCTAGGAGTTTCGGTGCTGCTGTTATCTACAATAATCACAAAGTCTGGGATGACCATTGGATATTCTGGGTTGGGCCATTCGTGGGGGCATTGGCTGCGGCTGCATACCACCAGTACATCCTGAGGGCAGCAGCTATCAAGGCATTGGGATCGTTCCGAAGCAACGCCACCAACTAA 849 0.5654 MVKEVSEEGQQSHHHGKDYVDPPPAPLIDLAELKLWSFYRALVAEFTATLLFLYVTVATVIGHKKQTGPCDGVGLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAISYMVAQCLGAVCGAGLVKAFMKHSYNSLGGGANSVSPGYTKGAALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNHKVWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSNATN* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2516 282 TIGRFAM MIP: MIP family channel proteins 44 260 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod09g2516 282 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 282 IPR034294 -
Dod09g2516 282 SUPERFAMILY Aquaporin-like 32 266 IPR023271 -
Dod09g2516 282 PRINTS Major intrinsic protein family signature 168 186 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod09g2516 282 PRINTS Major intrinsic protein family signature 204 226 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod09g2516 282 PRINTS Major intrinsic protein family signature 40 59 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod09g2516 282 PRINTS Major intrinsic protein family signature 244 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod09g2516 282 PRINTS Major intrinsic protein family signature 119 138 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod09g2516 282 PRINTS Major intrinsic protein family signature 82 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod09g2516 282 MobiDBLite consensus disorder prediction 1 20 - -
Dod09g2516 282 CDD MIP 40 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod09g2516 282 PANTHER BNAC03G65520D PROTEIN 1 282 - -
Dod09g2516 282 Pfam Major intrinsic protein 33 260 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod09g2516 282 Gene3D Glycerol uptake facilitator protein. 25 282 IPR023271 -
Dod09g2516 282 ProSitePatterns MIP family signature. 100 108 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2516 Dod-Chr9 46191719 46193883 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2516 1 282 Major Intrinsic Protein MIP AT4G35100 88.298 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2516 K09872 - twl:120002354 531.946