Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2508 ATGAGATGGTTCACTCAAGAACTGGTGGAGAGATTCTCAACCGGCATATATGTATGCAGTAGTTTAGTTCTTCTGCAAATCCAAGGAGGACTTGAATCAATCAATAGCCCTTTTGAGATTGATAAAACTAAAAGGCATTCAATGGCAGTCCTTGAGAGGAGATATGTTTTGGTGGGGATCAGAATGGACGACAGCCATAGCAGGCAACTGCTTAACTGGGCTCTTGTCAAAGTTGCAGAACCTGGGGATTGCGTAATTGCTGTCCACGTAGTTACAAATCCAGATTATGTTTCCAAAGGCAGGCCCTTGGTAGATGGTTATCTAGAGGTGTATGAAGGGCTATGCACTGTGAAGAAGGTAAGTCTCTCTGGCCAGATCTTTACAGGAAACTCAGTCCGAAACATTCTCGTCAGAGAGGCTAAAAACCATGCAGCTCTGGCTCTAGTGCTAGGGGGTCGAGCCTCCACAGCTAAATATTGCGCCAAACGACTACCACCCACTACCGATGTCCTAGCTATCCAAGGTTCTAGAGTTATCTTCAGAAGGTGCACCAATAAACAACTACCCGCAGGAGGTCTCATAGAGGATCCAAGACCAAGTCTTAAGAGCATAGTTTTGCAGTCTGAATTTGGTGACTCGGAGGTAGAGAGTGAGAAATCAACATGTGAAGATACCAGACAATTGAAGGAAGAAGCATTTGAAGGAACACACCGGTACAAGAGAGTGCTGTCAAGATCAGTATCGCAATTTGCAAGTGATCCGACCGCGAAGAACAAGCTTGGGTGGCCATTTCTCCGCAGTGCATGTTCAAAAATGTCCCAAATCCACCATGCAAATGCAAGGGGCATGTCTGCGGTGCAATGGGTTATGAGCTTACCGGATCGTTCCCCACAGAAAAGTTCCACCACTGACCAGGACAATTTATCCCAAGGGAGCATCATCGATGATTTTGGCAATGAGAGCTATGACAACTATTCCAGTTCAACTCCGTCTGTCGAGTTGCCAAACGAACTGGCCCTCCAGCTCCAGGGGATTTCATACTTGGATTCATTAAGGAATTGCAAGTGTTTCAGCCTTGAGGTTCTCAACTCATGCACTTGCCACTTCTCTTCAGACAATTTGATCGGAAAAGGAGGGAGCAATCGCGTGTACAAAGGAATCTTCCCTGATGGGAGACCAATCGCAGTCAAAATTTTGCAGTCATCAACAGAAGCCTTGAAAGATTTTACCCGTGAGGTGGAAATTATATCCTCTTTGAAGCACAAAGGCATCACCCCTCTACTTGGAATTTGCATGGAAGACAGTGTTTTATTTTCTGTTTATGATTATTTCCCCAAAGGAAGCTTAGAGGAAAATCTACACGGCAAGAAAAAGGATGGACATTTCTTGTCATGGGAAGTCAGGTTTAATGTAGCTGTTGGGATTGCGGAAGCACTAAATTACCTACACAACGAAACTTCGAAGCCTGTCATACATAGAGATGTCAAGTCCTCAAACATTCTTCTCTCCCATGGGTTTGAGCCACAATTATCTGATTTTGGATTTGCAATATGGGGACCAACGACTTCATCTTTTCTATCACAAGAAGACTTGGTAGGAACGTTTGGTTATCTTGCTCCCGAATACTTTATGTATGGAAAGGTCAGTGAAAAGATAGATGTGTATGCGTTTGGTGTAGTGCTACTTGAGCTAATATCAGGAAGGGAACCAATCAGCTCCGAGACTTGCAAAGGACAGGAGAGCCTGGTTGTGTGGGCAAAACCAATCTTAGAGAGTGGGGATGTTAAAGGCTTAGTGGATCCAAATTTACAAGGGAAATTTGATGTGGCCCAAATGCAAAAAATGGTTCTGGCAGCCTCTCTGTGCATTAGCCGGGCTGCTCGACTTCGTCCTACGTTGAATCAGGTACTGAAGATCCTAAAAGGAGAGGAGGAAGTTGCAAATTTGTTCAACTCTCAGGAGAATGATTATGACCGTGTAGAAAATCAAGAAAACATTGATGACGAAGTCTACCCAAATTCAAGTGCGGAGTTGCACCTGATGAGCCTTGCATTACTTGACCTTGACGATGACACTACATCATGGAGCACAGCAATAGTGAACCCTTGA 2109 0.4448 MRWFTQELVERFSTGIYVCSSLVLLQIQGGLESINSPFEIDKTKRHSMAVLERRYVLVGIRMDDSHSRQLLNWALVKVAEPGDCVIAVHVVTNPDYVSKGRPLVDGYLEVYEGLCTVKKVSLSGQIFTGNSVRNILVREAKNHAALALVLGGRASTAKYCAKRLPPTTDVLAIQGSRVIFRRCTNKQLPAGGLIEDPRPSLKSIVLQSEFGDSEVESEKSTCEDTRQLKEEAFEGTHRYKRVLSRSVSQFASDPTAKNKLGWPFLRSACSKMSQIHHANARGMSAVQWVMSLPDRSPQKSSTTDQDNLSQGSIIDDFGNESYDNYSSSTPSVELPNELALQLQGISYLDSLRNCKCFSLEVLNSCTCHFSSDNLIGKGGSNRVYKGIFPDGRPIAVKILQSSTEALKDFTREVEIISSLKHKGITPLLGICMEDSVLFSVYDYFPKGSLEENLHGKKKDGHFLSWEVRFNVAVGIAEALNYLHNETSKPVIHRDVKSSNILLSHGFEPQLSDFGFAIWGPTTSSFLSQEDLVGTFGYLAPEYFMYGKVSEKIDVYAFGVVLLELISGREPISSETCKGQESLVVWAKPILESGDVKGLVDPNLQGKFDVAQMQKMVLAASLCISRAARLRPTLNQVLKILKGEEEVANLFNSQENDYDRVENQENIDDEVYPNSSAELHLMSLALLDLDDDTTSWSTAIVNP* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2508 702 SMART serkin_6 369 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g2508 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 490 502 IPR008271 GO:0004672|GO:0006468
Dod09g2508 702 SUPERFAMILY Protein kinase-like (PK-like) 350 640 IPR011009 -
Dod09g2508 702 Gene3D Transferase(Phosphotransferase) domain 1 444 658 - -
Dod09g2508 702 Pfam Protein kinase domain 371 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g2508 702 Gene3D Phosphorylase Kinase; domain 1 340 443 - -
Dod09g2508 702 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK7 ISOFORM X1 48 693 - -
Dod09g2508 702 CDD USP_Like 56 173 - -
Dod09g2508 702 ProSiteProfiles Protein kinase domain profile. 369 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g2508 702 PANTHER OS08G0249100 PROTEIN 48 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2508 Dod-Chr9 46117900 46121516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2508 357 690 Trihelix Transcription Factor Family AT1G70460 38.643 6.11e-70 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Dod09g2508 Pkinase 5.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2508 - - lang:109355495 828.165