Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2503 ATGGGAAGGTCCCCGTGCTGTGAGAAGGCTCACACAAACAAAGGAGCATGGACCAAAGAAGAAGACGATCGCCTCATTGCTTACATCCGAGCTCACGGCGAGGGATGCTGGCGCTCTCTCCCCAAAGCCGCCGGCCTCCTCCGTTGCGGCAAGAGCTGCCGTCTCCGCTGGATCAACTATCTCCGCCCTGACCTCAAGCGCGGCAACTTCACCGACGAAGAAGACGACCTCATCATCAAACTCCACAGTCTCCTTGGCAACAAGTGGTCTCTAATAGCTGGGAGATTGCCCGGTAGAACAGACAATGAGATAAAGAACTACTGGAACACTCACATAAGAAGGAAGCTTCTCAGCAGAGGAATTGATCCCGCTACTCACAGGCCTCTCAACGACAATCAGTTAGAACCTGATATCATCGATGCGGGCACCACCACGATATCTAATAATAATAATAATAATAATAATAATAATCTGGCTGCTTCAAAACAAGAGGAAGATAGTACTAGCAACGGAAGCAGCAGCGTACAGTTTGGGGATTCCAATAAAAGAGCCGTCGTCTCCTTGGAGCGCTGCCCTGACGACTTGGACTTGAATCTGGAGCTAAGCATTAGTCCTCCCCACCAATACCATCATCATCCCATTCCCAACTATTCATCGAAGAGAGGCCTCAGCCCAGCTGCTTCTGCTTGCTTTTCATGCACTTTGGGGTTACAGAATACCAACGATTGCAGCTGTGGGATAATTGATGCTCCTAACATTGGCAGCAGCACCAATGGTGGGAGCGCCGCTGCTGCCGGCTATGATTTCCTGGGTTTGAAAACCACTGTTCTGGATTACAGAGGCCGCTTGGAAATGAAATGA 861 0.5006 MGRSPCCEKAHTNKGAWTKEEDDRLIAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTDEEDDLIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRGIDPATHRPLNDNQLEPDIIDAGTTTISNNNNNNNNNNLAASKQEEDSTSNGSSSVQFGDSNKRAVVSLERCPDDLDLNLELSISPPHQYHHHPIPNYSSKRGLSPAASACFSCTLGLQNTNDCSCGIIDAPNIGSSTNGGSAAAAGYDFLGLKTTVLDYRGRLEMK* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2503 286 CDD SANT 69 112 IPR001005 -
Dod09g2503 286 SMART sant 13 63 IPR001005 -
Dod09g2503 286 SMART sant 66 114 IPR001005 -
Dod09g2503 286 CDD SANT 16 61 IPR001005 -
Dod09g2503 286 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Dod09g2503 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Dod09g2503 286 MobiDBLite consensus disorder prediction 141 178 - -
Dod09g2503 286 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Dod09g2503 286 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Dod09g2503 286 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Dod09g2503 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Dod09g2503 286 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 250 - -
Dod09g2503 286 Gene3D - 69 116 - -
Dod09g2503 286 PANTHER TRANSCRIPTION REPRESSOR MYB4 1 250 - -
Dod09g2503 286 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Dod09g2503 286 Gene3D - 14 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2503 Dod-Chr9 46062801 46064453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2503 1 286 MYB Transcription Factor Family AT4G38620 55.705 1.51e-105 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod09g2503 Myb_DNA-binding 4.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2503 K09422 - cpap:110816432 367.081