Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2501 ATGCGTAGATTGATCTCGTTTCTCCTTCAGCCGCGATTCCTCCTCCTCCTCCTTGTCTTCTCAATTCTCCTCATCTTCGCATTATCTGGCGCCAAACGGGTTCAGGAGAAAGAAGAAGTACAGCCTGAAATTACACACAGAGTATTCTTGGATGTTGATATTGATGGACAACATTTAGGCAGGATTGTGATTGGATTATATGGCCAGGTTGTGCCAAAAACTGTAGAAAATTTTAGAGCTTTGTGCACAGGGGAGAAAGGCAAAAGTGCTAGTGGTGTAAAACTTAAATACAAAGGAACACCTTTTCATCGGATAATATCTGGTTTCGTGATTCAGGGTGGAGATATTGTTCATCATGATGGCAGAGGATATGTATCTGTTTATGGTGGCACCTTTCCTGATGAGAATTTTAAGATAAAACATTCACACGCTGGTGTTGTCTCTATGGTAAATTCAGGCCCTGATTCCAATGGCTCTCAGTTTTTCATTACCACAGTGAAGGCCAGTTGGTTGGATGGAGAACATGTTGTCTTTGGCAAGGTTGTTCAAGGCATGGATACCGTCTTTGCAATTGAAGGGGGAGCTGGAACCTACAATGGGAAACCCAGAAAGAAGGTAGTCATTACAGACTCTGGAGAGATACCCAAGAGCCAGTGGGATGAGGAAAGATGA 672 0.4315 MRRLISFLLQPRFLLLLLVFSILLIFALSGAKRVQEKEEVQPEITHRVFLDVDIDGQHLGRIVIGLYGQVVPKTVENFRALCTGEKGKSASGVKLKYKGTPFHRIISGFVIQGGDIVHHDGRGYVSVYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVVQGMDTVFAIEGGAGTYNGKPRKKVVITDSGEIPKSQWDEER* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2501 223 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 23 222 - -
Dod09g2501 223 SUPERFAMILY Cyclophilin-like 42 214 IPR029000 -
Dod09g2501 223 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 49 213 IPR002130 GO:0000413|GO:0003755
Dod09g2501 223 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 102 114 IPR002130 GO:0000413|GO:0003755
Dod09g2501 223 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 66 81 IPR002130 GO:0000413|GO:0003755
Dod09g2501 223 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 160 172 IPR002130 GO:0000413|GO:0003755
Dod09g2501 223 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 145 160 IPR002130 GO:0000413|GO:0003755
Dod09g2501 223 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 173 188 IPR002130 GO:0000413|GO:0003755
Dod09g2501 223 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 52 211 IPR002130 GO:0000413|GO:0003755
Dod09g2501 223 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 23 222 - -
Dod09g2501 223 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 97 114 IPR020892 GO:0003755|GO:0006457
Dod09g2501 223 Gene3D - 33 220 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2501 Dod-Chr9 46029815 46033554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2501 60 211 U-box Gene Family AT5G67530 41.176 1.60e-25 102