Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2485 ATGTATTCTTGTCAACAGACAACCCTCAGGCTCATTCCAAAGGGAAAAATGGTGTTGATTATTCATCCTCTTGCAGTTGCAGTGAAGTTGGTAGTATTAGTTGCCCTGCGCGATTGCTATGACCCCTTGGATCCAAATGGGAACATTTCAGTCACTTTTGACATTTTCCAACGTACAGACAATCATGGATATCTGGCAAGGGTGACTCTTCAAAACTATTATCAATATCGGCATGTGGACAAACCAGGTTGGCGGCTAGGATGGGAATGGGCCAGCAAAGAAGTGATATGGTCAATAAGTGGTGCAGTTGCAACTGATCAAGGGAACTGCTCATCCTACAGCTCTCAGCTGCCACATTCCTGTGACACAGACCCCGTCATAGTTGATCTCCCTCCGGATGTGTCACCACAGATCAGGTCAGAAAACTGCTGCCGCGGTGGCCTTCTCTCCGCTTGGGCTGTCAATCCTTCAAAGTCATTCTCTTCATTTGAACTTGAAGTTCGCAACGTGGGCCAAAACCCACTTGGGCAAGCTCCTAAAAATCTTACATTCATGGCCCCAGGTCCTGGTTACACTTGTAGCCCTCTTCTGGATACTGATCCCACCCTCATCTCATATTATGGGGGACAAAGACGAGTTCCCGCTCTCAGAACTTGGAAGTCAACGTGTACATACTCTAGTTTTGTAGCAAACAAGTCACCAGTATGCTGTGTATCCCTCTCAACGTTTTACAATCGCGACATCACATCATGCCCTGATTGCAGCTGTGGATGCAGCGAAGCAGTTAAAAGTACTGCGTCTTGCATAAGGCCAGGTGATCCCTTGATACAGTCGAAGGAGGTCGACATAATAGCATGCACTAATCACATGTGTCCAATTCGAGTCCATTGGCATTTTAAAAACAACTATGTGGATCATTGGAGGGTGAAGCTTACCGTGTCTAACTACAACTATAATAGGAACTACTCAAACTGGAATGTACTGGTTCAACATCCTGGTTTCACCCAAAATGCAACATCTTACAGCTTCAACAACGCCAAACTTCCCATTGGGCTTCAGGGTACTTCTCGAGTAAACTCTAGCACTTGGAATTATAGGTTTGAGTGA 1107 0.4571 MYSCQQTTLRLIPKGKMVLIIHPLAVAVKLVVLVALRDCYDPLDPNGNISVTFDIFQRTDNHGYLARVTLQNYYQYRHVDKPGWRLGWEWASKEVIWSISGAVATDQGNCSSYSSQLPHSCDTDPVIVDLPPDVSPQIRSENCCRGGLLSAWAVNPSKSFSSFELEVRNVGQNPLGQAPKNLTFMAPGPGYTCSPLLDTDPTLISYYGGQRRVPALRTWKSTCTYSSFVANKSPVCCVSLSTFYNRDITSCPDCSCGCSEAVKSTASCIRPGDPLIQSKEVDIIACTNHMCPIRVHWHFKNNYVDHWRVKLTVSNYNYNRNYSNWNVLVQHPGFTQNATSYSFNNAKLPIGLQGTSRVNSSTWNYRFE* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2485 368 PANTHER PROTEIN COBRA 25 349 IPR006918 GO:0010215|GO:0031225
Dod09g2485 368 PIRSF COBRA 12 365 IPR006918 GO:0010215|GO:0031225
Dod09g2485 368 PANTHER COBRA-LIKE PROTEIN 25 349 - -
Dod09g2485 368 Pfam COBRA-like protein 64 226 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2485 Dod-Chr9 45881455 45883567 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2485 24 348 COBRA Gene Family AT3G02210 45.882 1.13e-108 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2485 - - vra:106760500 516.924