Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2479 ATGGGTTTTCGCTTACCTGCTGTTAGACGTCCATCATTTGGTGCAAGCCATGATTCAAGAAAGGCAGTGGACGTCCCAAAAGGCTATTTTGCAGTCTATGTTGGAGAGAAAATGAAGAGGTTTGTGATTCCAGTATCATTCTTGAACGAGCCCTTATTTCAAGAATTGCTTAGCCTTGCTGAGGAGGAGTTCAGTTTCTGTCATCCTACTGGTGGTCTCACAATTCCCTGCGAGGAAGATATGTTCTTAAATACAGCTTCTCGCTTGAATGGGCTATAG 279 0.4373 MGFRLPAVRRPSFGASHDSRKAVDVPKGYFAVYVGEKMKRFVIPVSFLNEPLFQELLSLAEEEFSFCHPTGGLTIPCEEDMFLNTASRLNGL* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2479 92 Pfam Auxin responsive protein 15 86 IPR003676 GO:0009733
Dod09g2479 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 3 90 IPR003676 GO:0009733
Dod09g2479 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 3 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2479 Dod-Chr9 45836363 45836860 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2479 24 82 Calmodulin-binding Proteins AT3G43120 59.322 7.37e-19 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2479 K14488 - gmx:100500615 135.191