Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2478 ATGGGTTTTCGTTTACCTGGCCTTAGACGTTCATCCTTTGGTGCAAGTCAAGCATCTAGAAAGGTTGTGGACGTCCCCAAAGGCTATATTGCAGTCTACGTTGGAGAGAAAATGAAGAGACTTGTGATTCCCGTATCATTCTTGAAGGAGCCCTTATTTCAAGAGTTACTTACCCACACTGAAGAGGAGTTTGGTTACAGTCATCCTATGGGAGGTCTCGCAATTCCCTGCAAGGAAGATATGTTCTTAGATATAGCTTCACGCCTGAACGGGCTACAGTTCATACCGCAGAAGATCTTAACATAG 306 0.4444 MGFRLPGLRRSSFGASQASRKVVDVPKGYIAVYVGEKMKRLVIPVSFLKEPLFQELLTHTEEEFGYSHPMGGLAIPCKEDMFLDIASRLNGLQFIPQKILT* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2478 101 Pfam Auxin responsive protein 13 88 IPR003676 GO:0009733
Dod09g2478 101 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 2 90 IPR003676 GO:0009733
Dod09g2478 101 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 2 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2478 Dod-Chr9 45825570 45825875 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2478 24 82 Calmodulin-binding Proteins AT3G43120 52.542 8.72e-17 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2478 K14488 - gmx:100500615 149.443