Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2472 ATGTCTCCGGCGACCGGGAAATGCAGCAGGATCGGGCACATTGTCCGAGTGCGGCAAATGCTACTCCGGTGGCGCAAGAAATCGAGCACGACGGCGAATTGGGCGCCGTCGGATGTGCCGGCGGGGCACGTGGCAGTGTACGTGGGGCCGAGCAGCGTGAGGTTCGTCGTGCGCGCGACGCACCTGAACCATCCAATGTTCAAGAAGCTTCTGGTGCAGGCGGAGGAAGAGTACGGGTTCAGCAGGCAAGGCCCGTTGACAATCCCGTGCGACGAGCGGGTCTTCGAAGAGGTCCTCCGGGTCATGACCCGCTCCGACTCGGCCCGCTTCTCCAGTCTAGAAGATTTCCAGAGGCGTTGCCACGTGGACGTCCCAAGTTTTTTTGACGTTGTAGGAGAATCCAGGCCCTTGCTTCATTAG 420 0.6071 MSPATGKCSRIGHIVRVRQMLLRWRKKSSTTANWAPSDVPAGHVAVYVGPSSVRFVVRATHLNHPMFKKLLVQAEEEYGFSRQGPLTIPCDERVFEEVLRVMTRSDSARFSSLEDFQRRCHVDVPSFFDVVGESRPLLH* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2472 139 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 137 IPR003676 GO:0009733
Dod09g2472 139 PANTHER SMALL AUXIN-UP RNA-RELATED 7 137 - -
Dod09g2472 139 Pfam Auxin responsive protein 16 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2472 Dod-Chr9 45786371 45786920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2472 6 138 Calmodulin-binding Proteins AT4G34750 50.350 1.62e-42 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2472 K14488 - jre:108986945 214.927