Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2470 ATGGCCGCCGCATCATACCTCTCAACCCTCTCCAAACCCTCCTCTCTCTCCCCCCCAAACTCTTGTTTCCACACCAAACCCCTCCAAAACCCCTCCACCTTCTTCCCTCATTCACCCTCTGAACCCCACAACAAAACACCCCACTCATCATCATCACTCTCACTCCAATGCAAGAATTCAATCTCCGATATCATCGTGTCCGCAAACAACACACCCCAACAAGACTTGTCCTTCTACAACCACGACGACGACGAAAAGCCCCGCGAAGAGTGCGGCGTGGTGGGCATCTACGGCGACCCGGAGGCCTCTCGGCTCTGCTACCTCGCCCTCCACGCCCTCCAACACCGCGGCCAAGAAGGCGCCGGGATCGTGGCCGTCCACAACAACGTCCTTCAATCCATTACCGGCGTTGGCCTTGTCTCCGACGTCTTCAACGAGTCCAAGCTCGATCACTTGCCTGGAACTTCAGCCATTGGCCACGTTCGTTACTCAACCGCAGGCCAATCCATGCTCAAGAATGTTCAGCCTTTCGTCGCAGGCTACCGCTTTGGCTCCGTTGGGGTTGCTCATAACGGCAACTTTGTCAACTACCGATCGCTGAGGGCCAAACTCGAAGACAACGGTTCCATCTTCAACACAAGTTCTGACACCGAGGTTGTGCTCCATCTTATTGCCACATCGAAGCACAGGCCTTTCCTGTTGAGGATTGTGGACGCGTGTGAGAAGCTTCAAGGGGCCTATTCTTTCGTGTTTGTCACCGAGGACAAGCTTGTTGCTGTGAGGGACCCCTTCGGGTTTCGACCTTTGGTCATGGGGAGGAGAAGTAACGGTGCCGTTGTTTTTTCCTCTGAGACATGCGCCCTCGATTTGATTGAAGCCACATATGAGAGGGAAGTGTTCCCCGGTGAGGTTGTGGTGGTGGACCAGAGTGGAGTGGAGTCTCTTTGCCTAATGTCTCATCCGCAGCCAAAGCAATGTATCTTTGAGCACATATACTTTGCGCTGCCCAATTCAGTGGTCTTTGGGAGGTCAGTGTACGAGTCTCGCAGGAAATTTGGAGAAATATTGGCCACTGAGAGCCCCGTTGAGTGTGATGTTGTGATAGCGGTTCCTGATTCTGGGGTTGTGGCTGCGCTTGGTTATGCTGCGAAAGCTGGGGTCTCTTTTCAGCAGGGTCTCATCAGGTCACACTATGTTGGGAGGACCTTCATTGAGCCGTCACAGAAGATTAGGGACTTCGGTGTGAAGCTGAAGCTCTCACCAGTTCGTGCTGTGCTTGAAGGCAAGAGGGTTGTGGTTGTGGATGACTCCATTGTGAGGGGAACCACATCCTCCAAGATTGTGAGGTTGATAAAGGAGGCTGGTGCCAAGGAAGTTCACATGAGGATTGCGTGCCCTCCAATTATTGGTTCGTGTTATTATGGGGTGGACACCCCTAGCTCTGAGGAGTTGATCTCTAATAGGATGGGTGTGGATCAGATAAGGGAGTTCATTGGATCGGACTCGCTTGCTTTTCTTCCGCTTGATAGCTTGAAGAAGCTGTTGGGTAGTGACTCTCCCAATTTCTGTTTTGCTTGCTTCTCTGGGGTGTACCCTGTTGAGCCCAAGGAGCTTAAAGTGAAGAGGGTTGGTGACTTTGTGGACGATGGCTTAAATGGGAGTTTCGAATCTATTGATGGGGGTTGGGTTCAGGCAAACCCAAATCAGAAAGATGTGAAGATTGTTAGCCTCTGA 1734 0.5213 MAAASYLSTLSKPSSLSPPNSCFHTKPLQNPSTFFPHSPSEPHNKTPHSSSSLSLQCKNSISDIIVSANNTPQQDLSFYNHDDDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVAVHNNVLQSITGVGLVSDVFNESKLDHLPGTSAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNFVNYRSLRAKLEDNGSIFNTSSDTEVVLHLIATSKHRPFLLRIVDACEKLQGAYSFVFVTEDKLVAVRDPFGFRPLVMGRRSNGAVVFSSETCALDLIEATYEREVFPGEVVVVDQSGVESLCLMSHPQPKQCIFEHIYFALPNSVVFGRSVYESRRKFGEILATESPVECDVVIAVPDSGVVAALGYAAKAGVSFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLIKEAGAKEVHMRIACPPIIGSCYYGVDTPSSEELISNRMGVDQIREFIGSDSLAFLPLDSLKKLLGSDSPNFCFACFSGVYPVEPKELKVKRVGDFVDDGLNGSFESIDGGWVQANPNQKDVKIVSL* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2470 577 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 91 532 IPR029055 -
Dod09g2470 577 CDD PRTases_typeI 353 464 IPR000836 -
Dod09g2470 577 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 29 563 - -
Dod09g2470 577 Hamap Amidophosphoribosyltransferase [purF]. 90 531 IPR005854 GO:0004044|GO:0009113
Dod09g2470 577 TIGRFAM purF: amidophosphoribosyltransferase 91 532 IPR005854 GO:0004044|GO:0009113
Dod09g2470 577 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 29 563 - -
Dod09g2470 577 SUPERFAMILY PRTase-like 326 536 IPR029057 -
Dod09g2470 577 MobiDBLite consensus disorder prediction 7 54 - -
Dod09g2470 577 Gene3D - 350 514 IPR029057 -
Dod09g2470 577 MobiDBLite consensus disorder prediction 1 54 - -
Dod09g2470 577 Pfam Glutamine amidotransferase domain 169 288 IPR017932 -
Dod09g2470 577 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 91 313 IPR029055 -
Dod09g2470 577 CDD GPATase_N 91 341 IPR035584 -
Dod09g2470 577 Pfam Phosphoribosyl transferase domain 349 461 IPR000836 -
Dod09g2470 577 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 91 310 IPR017932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2470 Dod-Chr9 45769409 45771883 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2470 76 564 PRT Gene Family AT2G16570 83.910 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2470 K00764 - gmx:100791919 910.212