Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2469 CAGCAAACCCCGGAGCAACTGGTAGCGAGGGCTATAACCCCTATCAAAAAGGAATTCCTCCGCCCTCCTCCTGTTCGCCCTTCCTCCGCTAACGACGACGTCGTTTCCACCGCTCAATCTCAGTCTCATTCAGCTTCAGGTTCAGCAGTGCTCAAGGAAAAGAAGTCCAAGCGCCAGCTCAAACGTGAACGTCGTCAGAAGTCAGTACGAAACCTCTGCCCCGAACTTGCAAAGACCGGTGATGTTACTTCGTGTCCTTATGACAAATGCCGCTTCAGCCACGATATTGAAGCCTTCAAGGCCCAGAAACCAGCTGATCTAGAGGGACAATGCCCTTTTGTTAAATCTGGAGGGCCTTGCCCTTATGGCTTAGCATGTAGATTTTCAAGTACCCATGAAGATGGTGTGCCGCCTTCTTCTGGAAATCTCAATGGTATTAAGAGTAGTTCTGAGGTGAATGGATTGAGCAAAGATGTTCAGAAGCTTTTGTGGAAAAACAAGATGAGCTTCCCCAAGGCAGATGCCAAACTCAAAAGTCTTGGCCTCTGGGGCCTCTCTAAGTCAAAAATGAAGGACTTGGAAAATAAAGATGGTGACAACAATGGGTCAAATAAATGTGATCGTTCTGATGAGAATGGCTCTTGTGAAGTAACCTCTGACTCAGGTTCTAAGTTGGAAGAAGCTATAAAAGATTATGACATTGATGAAAAAATTGAATCTGATGAACTTTGTCCCCAGAAGAGAAGAAAAACTGCAGAAAATGATGAGCCTGGTGAGACAGAAAATGAAGGTCATATCTTCATCTTCTGCTTTCTGAATTTTGTTACTGAGCAAATTGTTGAAAGAAGCAGCATAAAAGCTGATCCAGAAGCAGGAAGTGATGCCATAACCACAGAAACTGATCTAAGTCTGAAGTTGCATTCACGTGAGAAAAAGCTTATTGATTTTAGGGAGAAGTTGTATCTTGCACCCTTGACTACTGTTGGAAATCTCCCTTTTCGGAGGGTTTGCAAAGTATTAGGAGCTGATGTAACATGTGGTGAGATGGCAATGTGCACAAATCTTTTGCAGGGTCAAGCTTCAGAATGGGCATTGCTGAGACGTCATTCATCTGAAGATTTGTTTGGTGTGCAAATATGTGGTGCATATCCAGATACTGTGGCACGAGCAGTTGAACTTATAGAACAGGAATGTACGATAGATTTTATTGATATAAATATGGGTTGCCCTATTGACATTGTTGTCAATAAGGGTGCTGGATCAGCTCTTCTGAAACCAATGCGGATGAAAAATATTGTACAAGTAGCTTCAAGCACGGTGGATAAACCAATAACTGTCAAGGTGCGGACAGCTTATTTTGAAGGGAAGAATCGTATTGATTCTCTGATTGCTGACATCAGCTCTTGGGGAGCTACTGCAGTAACAATTCATGGTAGATCACGACAACAACGGTATAGCAAGCTTGCTGACTGGGACTACATATACCAGTGTGCAAGGAAGGCCCCAAAGACTCTGCAAGTAGTGGGGAATGGGGATGTTTTTTCATTTTTAGATTGGAGTAACCACAGAACTGCATGCCCTGAACTTGCTACCTGCATGATTGCCCGCGGTGCTCTGATTAAACCTTGGATATTTACGGAGATCAAGGAACAGAGACATTGGGATATTGGTTCTGGCGAGCGACTAACTATTCTCAAAGATTTTGTGCATTTTGGCCTTGAACACTGGGGTTCTGACACAAAAGGAGTTGAGACAACCCGGCGGTTCTTGTTGGAATGGCTTAGCTACGCTTGTAGATATGTACCTGTTGGTCTTTTGGATGTGATTCCACAACGAATAAATTGGCGACCGCCATCTTACTATGGGCGTGATGAGCTGGAGACTCTGATGGCCTCAGACTCTGCAGCTGACTGGATACGAATATCAGAGATGTTACTAGGCAAGGTTCCAGACGGCTTTACATTTGTTCCAAAGCACAAATCAAATGCTTACGATAGAGCCGAAAATGGT 2010 0.4403 QQTPEQLVARAITPIKKEFLRPPPVRPSSANDDVVSTAQSQSHSASGSAVLKEKKSKRQLKRERRQKSVRNLCPELAKTGDVTSCPYDKCRFSHDIEAFKAQKPADLEGQCPFVKSGGPCPYGLACRFSSTHEDGVPPSSGNLNGIKSSSEVNGLSKDVQKLLWKNKMSFPKADAKLKSLGLWGLSKSKMKDLENKDGDNNGSNKCDRSDENGSCEVTSDSGSKLEEAIKDYDIDEKIESDELCPQKRRKTAENDEPGETENEGHIFIFCFLNFVTEQIVERSSIKADPEAGSDAITTETDLSLKLHSREKKLIDFREKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTVARAVELIEQECTIDFIDINMGCPIDIVVNKGAGSALLKPMRMKNIVQVASSTVDKPITVKVRTAYFEGKNRIDSLIADISSWGATAVTIHGRSRQQRYSKLADWDYIYQCARKAPKTLQVVGNGDVFSFLDWSNHRTACPELATCMIARGALIKPWIFTEIKEQRHWDIGSGERLTILKDFVHFGLEHWGSDTKGVETTRRFLLEWLSYACRYVPVGLLDVIPQRINWRPPSYYGRDELETLMASDSAADWIRISEMLLGKVPDGFTFVPKHKSNAYDRAENG 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2469 670 ProSiteProfiles Zinc finger C3H1-type profile. 67 97 IPR000571 GO:0046872
Dod09g2469 670 ProSitePatterns Uncharacterized protein family UPF0034 signature. 403 421 IPR018517 GO:0008033|GO:0017150|GO:0050660
Dod09g2469 670 Gene3D - 62 139 - -
Dod09g2469 670 CDD DUS_like_FMN 319 553 IPR035587 -
Dod09g2469 670 Pfam Dihydrouridine synthase (Dus) 322 553 IPR035587 -
Dod09g2469 670 SUPERFAMILY FMN-linked oxidoreductases 319 631 - -
Dod09g2469 670 MobiDBLite consensus disorder prediction 133 150 - -
Dod09g2469 670 MobiDBLite consensus disorder prediction 14 71 - -
Dod09g2469 670 MobiDBLite consensus disorder prediction 191 222 - -
Dod09g2469 670 MobiDBLite consensus disorder prediction 131 150 - -
Dod09g2469 670 PANTHER TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE 13 670 - -
Dod09g2469 670 PANTHER TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE 13 670 - -
Dod09g2469 670 MobiDBLite consensus disorder prediction 191 214 - -
Dod09g2469 670 MobiDBLite consensus disorder prediction 30 49 - -
Dod09g2469 670 Gene3D Aldolase class I 314 555 IPR013785 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Dod09g2469 Dus 2.7e-49 CL0036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2469 K05544 - gmx:100783494 1097.8