Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2448 ATGCCGACGACTAGAACACAAGGTGGCCAAGAAGAAGCAGCAAGAGGCCCAAAGTGCCAAGACTGTGGGAACCAAGCCAAGAAGGAGTGTTCATACTCGAGGTGCAGAACCTGCTGCAAGAACAAAGGGTTCAATTGCCAAACCCATATCAAGAGCACTTGGATCCCTGTGGATAGAAGGCGCCACAGAGAGGACCACCCCTCTCCCTCTACTAATCCCCTCCTCTTTCAGGGAGATACCTCTAAAAGACACAAGCACAACCCATATTCAGGTGTCGAGGAGTTAAAGTTTCCAGCTGCTACGAATTCCATGGCGATATTTCGGCGTGTTCAGGTTCGGTCGATGGATGATACGGTAAACGAAACCGCCTATCAAACGTCTGTGAACATTGGAGGACATGTATTTAGTGGTCTTCTTTATGATCAAGGCCTTGACCAAAGTGTTTATGCTAAGGGTGACAGTTCCACCGGCCCTCTAATTGATCAACAACATAATCTTAGTGTTTTAAGTGCTTCAACCCAAACCAATGACGGTGCAATTATGCCTCCGTTATCATCAGCCTCTGCTGCTCCTCATGATGAGCCCTTTTTGCCTCCATCATATCCGTTTCCCCTTGCTTCTTTCAGGCCTGGTATGCCATATTTCTCATATCCAAAACCTTAA 663 0.4721 MPTTRTQGGQEEAARGPKCQDCGNQAKKECSYSRCRTCCKNKGFNCQTHIKSTWIPVDRRRHREDHPSPSTNPLLFQGDTSKRHKHNPYSGVEELKFPAATNSMAIFRRVQVRSMDDTVNETAYQTSVNIGGHVFSGLLYDQGLDQSVYAKGDSSTGPLIDQQHNLSVLSASTQTNDGAIMPPLSSASAAPHDEPFLPPSYPFPLASFRPGMPYFSYPKP* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2448 220 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 96 144 IPR006511 -
Dod09g2448 220 MobiDBLite consensus disorder prediction 1 25 - -
Dod09g2448 220 MobiDBLite consensus disorder prediction 59 84 - -
Dod09g2448 220 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 18 60 IPR006510 -
Dod09g2448 220 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 7 189 IPR007818 GO:0003700|GO:0006355
Dod09g2448 220 PANTHER BNAC01G23660D PROTEIN 7 189 - -
Dod09g2448 220 Pfam Domain of unknown function (DUF702) 17 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2448 Dod-Chr9 45541601 45543157 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2448 19 219 C2H2 Transcription Factor Family AT3G51060 42.672 5.95e-43 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Dod09g2448 DUF702 1.3e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2448 - - gmx:100790751 267.7