Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2435 ATGGCTTCCTCAAGCGGAACATCATCAGGGTCGTCTTCTATGGTCCAAAACTCTGGTTCAGAGGAGGACTTGCAAGCGCTGATGGATCAGCGGAAGAGGAAGAGAATGATCTCAAACCGTGAATCAGCAAGGCGATCCAGAATGAGGAAGCAGAAGCACTTAGATGATCTGGCTTCCCAGGCGGCTCAGCTGAGAAGCGAGAATCACCAGATTCTGACATCCCTCAACATCACCACCCAGCGGTACTCGGCCATTGAGGCTGAGAACTCGGTGCTCAGAGCCCAAGTGGGTGAGCTGAGCCACAGGCTAGACTCCTTGAACGAGATCGTGGGCTTCTTGAATGCCAGCAGCAACGGAGTCTTTGGACCCTCAGGTTCATCACCAAGCACTTTCGTTGAGCCTGCCGCTGATAGCTTCTTCAACCCTTTGAGTATGGCCTATTTGAACCAGCCCATCATGGCTTCTGCAGACATGTGGCAGTACTGA 486 0.5267 MASSSGTSSGSSSMVQNSGSEEDLQALMDQRKRKRMISNRESARRSRMRKQKHLDDLASQAAQLRSENHQILTSLNITTQRYSAIEAENSVLRAQVGELSHRLDSLNEIVGFLNASSNGVFGPSGSSPSTFVEPAADSFFNPLSMAYLNQPIMASADMWQY* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2435 161 Gene3D - 29 82 - -
Dod09g2435 161 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 92 IPR004827 GO:0003700|GO:0006355
Dod09g2435 161 SUPERFAMILY Leucine zipper domain 31 82 IPR046347 GO:0003700|GO:0006355
Dod09g2435 161 Pfam bZIP transcription factor 31 74 IPR004827 GO:0003700|GO:0006355
Dod09g2435 161 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
Dod09g2435 161 MobiDBLite consensus disorder prediction 1 24 - -
Dod09g2435 161 MobiDBLite consensus disorder prediction 1 51 - -
Dod09g2435 161 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
Dod09g2435 161 Coils Coil 47 67 - -
Dod09g2435 161 MobiDBLite consensus disorder prediction 25 51 - -
Dod09g2435 161 PANTHER BZIP TRANSCRIPTION FACTOR 1 160 - -
Dod09g2435 161 CDD bZIP_plant_GBF1 32 83 IPR045314 GO:0003700|GO:0006355
Dod09g2435 161 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2435 Dod-Chr9 45466383 45466868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2435 25 161 bZIP Transcription Factor Family AT4G34590 56.115 4.12e-49 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod09g2435 bZIP_1 2e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2435 K25786 - rcu:8285748 222.631