Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2415 ATGTTGCACTGTCTGAACCCTTCGGGGAACCTAGGTGGGAGCTGCTCCGACATGACCGTCTTGGAAAGGCAAAGGGCAAGGATGAAGTGGCAACAAGACCACCACCACGAACACCAACAACATCAGCACCAACACCAAGGTTACTGTTCTGCAAGTGGTGTGTTCTCTTCTTCTCTGCAAGTTCATGATTCCGGTTCTTCACTTGCTGATGTGGTGGCTCATTCCATCAAGCCTGACCCCATGCCCAACGGATGGCCCAAACTCGACAAGGTTGTCATGGGGTTCGGTTCTTCAGGATTGCCACCTCTTCCTGTTCCTGCTCCTGCGGCATCTTCTGGGTTTGATGCGAATTCTGCAATTTCAAGGACCTCTAGCTGTCCTCCTGTTCTGGCGGAGGAGGCCAAAGGGAAAGAGAGTTTTAAGAAGAGGAAAGCTGACAAGCCTCCCAATACCAAGGTTGTTGCAGAAAGTGATGACAAAGACAAGAGGATCAAAGTGGGTGCTGAGGATGGGGAATCCAAAATCACTGGCCAAACCAGCACCAAGAATAACTCAGCAACCACCAATAACAAGAACAACACAGATACTACTATTTGTGCAGATGCTACTCCCAAAGAGAATTCAAAGGCGCCTGAGGTTCAGAAGCCTGATTACATTCACGTCCGAGCGCGTCGTGGCCAAGCCACTGATAGCCACAGCTTAGCTGAAAGAGTTAGAAGGGAAAAAATTAGCGAGAGAATGAAGTACTTGCAAGATTTGGTACCCGGTTGCAACAAGATTACTGGAAAAGCTGGAATGCTTGATGAAATCATCAACTATGTCCAGTCTCTTCAACGACAAGTTGAGTTCTTGTCAATGAAATTAGCTGCTGTGAACCCAAGGCTTGACTTCAACCTTGAAGATCTGTTCGCCAAAGAGGGGTTTCCTGGTTGTGATGCTGCAAGTTTTCCAGCCATAGGGATGTCACCAGACATGGCTAACCCTGCACCTTATCTTCAGTTTAATTCACCACAGCAGATAGTTCCGGGTCAAGGGTTAGATGCAGCAGGGATAAACCCTCCAGACATGGGCCTTCGAAGGACCATTAGTGCCCCAGTGTCGTTGCCCGAAACCTTTGTTGACTCACCCAGTTTCACTCAAATTCTGCCCTCCTCAACATGGGAAGGTGACTTCCAAAACCCTTACAATGTGGCTTTTGATCAAGCACGAGCACCATCCTTTCCTTCTCAGCTGTTCACAGGTCTAATTGAGCCTAGCAATCTAAAGATGGAGATGTAA 1278 0.4812 MLHCLNPSGNLGGSCSDMTVLERQRARMKWQQDHHHEHQQHQHQHQGYCSASGVFSSSLQVHDSGSSLADVVAHSIKPDPMPNGWPKLDKVVMGFGSSGLPPLPVPAPAASSGFDANSAISRTSSCPPVLAEEAKGKESFKKRKADKPPNTKVVAESDDKDKRIKVGAEDGESKITGQTSTKNNSATTNNKNNTDTTICADATPKENSKAPEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNLEDLFAKEGFPGCDAASFPAIGMSPDMANPAPYLQFNSPQQIVPGQGLDAAGINPPDMGLRRTISAPVSLPETFVDSPSFTQILPSSTWEGDFQNPYNVAFDQARAPSFPSQLFTGLIEPSNLKMEM* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2415 425 MobiDBLite consensus disorder prediction 133 211 - -
Dod09g2415 425 CDD bHLH_AtBPE_like 217 302 - -
Dod09g2415 425 Pfam Helix-loop-helix DNA-binding domain 231 278 IPR011598 GO:0046983
Dod09g2415 425 MobiDBLite consensus disorder prediction 173 203 - -
Dod09g2415 425 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 227 277 IPR011598 GO:0046983
Dod09g2415 425 PANTHER TRANSCRIPTION FACTOR BHLH63-LIKE 16 406 - -
Dod09g2415 425 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 225 296 IPR036638 GO:0046983
Dod09g2415 425 MobiDBLite consensus disorder prediction 134 170 - -
Dod09g2415 425 Gene3D - 224 298 IPR036638 GO:0046983
Dod09g2415 425 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 16 406 IPR024097 GO:0006355
Dod09g2415 425 SMART finulus 233 283 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2415 Dod-Chr9 45341567 45344431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2415 121 340 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 49.590 2.77e-58 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod09g2415 HLH 2.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2415 - - jre:109013802 445.277