Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2414 ATGGCTTCAAGCTCTCTCGGCAAACAAAGGCCTTGTGACTCCTCTTGGACTCCGAAACAGAACAAGTTGTTTGAAAAGGCACTTGCAAAATATGACAAGGATACACCTGACCACTGGCAGAATGTGGCCAAGGAAGTTGGTGGCAAATCAGTTGAGGAAGTGAGGAGGCACTATGAGATCCTCTTAGAGGATCTCAGACACATTGAGTCCGGCCATGTTCCCATTCCCAACTACAAGTCCACTACAAGTAGCAGCAATGTCGATAAAGAAGACAGGCAAAGTTGGGCAGAACAATCACATCATAATGCTACGTGTCATCCATGGTCTCCGCCCAACATTCTGCCTAGAGGTCTCCGCCCAGCAATTTGCCTAAGGGTCTTCGCTTGGGATCCCTGCCCAGCATTCCACCTGGGGTCTCCACCTAGCATTCAGCCTAGGGGTCTCTGCCCAATAGTCTCCGCTTGGCAGTCTACTTAG 477 0.501 MASSSLGKQRPCDSSWTPKQNKLFEKALAKYDKDTPDHWQNVAKEVGGKSVEEVRRHYEILLEDLRHIESGHVPIPNYKSTTSSSNVDKEDRQSWAEQSHHNATCHPWSPPNILPRGLRPAICLRVFAWDPCPAFHLGSPPSIQPRGLCPIVSAWQST* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2414 158 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 82 IPR044636 GO:0003700
Dod09g2414 158 CDD SANT 15 62 IPR001005 -
Dod09g2414 158 Pfam Myb-like DNA-binding domain 14 58 IPR001005 -
Dod09g2414 158 ProSiteProfiles SANT domain profile. 11 66 IPR017884 -
Dod09g2414 158 Gene3D - 9 75 - -
Dod09g2414 158 PANTHER PROTEIN RADIALIS-LIKE 3 1 82 - -
Dod09g2414 158 MobiDBLite consensus disorder prediction 75 89 - -
Dod09g2414 158 MobiDBLite consensus disorder prediction 73 110 - -
Dod09g2414 158 ProSiteProfiles Myb-like domain profile. 8 62 IPR001005 -
Dod09g2414 158 SUPERFAMILY Homeodomain-like 14 70 IPR009057 -
Dod09g2414 158 SMART sant 12 64 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2414 Dod-Chr9 45324612 45327012 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod09g2414 Myb_DNA-binding 1.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2414 - - gmx:100785292 162.155