Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2411 ATGGCTTCTTCAGAAATTGAGTACCGTTGCTTTGTTGGTGGGCTTGCCTGGGCCACCGACAGCGATGCCCTCGAGAAAGCCTTCGCTCACTTTGGCGAGATCGTCGAATCGAAGGTTATCAACGACCGTGAGACTGGAAGGTCGAGGGGTTTCGGATTCGTGACCTTCGCTACGGAACAGGCCATGAGGGATGCCATCGAAGGGATGAACGGCCAGAACCTTGACGGCCGAAATATCACTGTCAACGAGGCTCAGTCCCGCGGAAGAGGCGGTGGTGGTGGTGGCGGTGGTTACGGAAGCGGTGGTGGCGGCGGTGGATATGGAGGCGGAGGTTATAGCCGCGGTGGAGGAGGCGGATACGGAGGCGGTGGCCGCCGCGAAGGTGGAGGCGGCTACAACCGCAACGGAGGTGGAGGCTATGGTGGCGGCGGTAGCGGTGGATACGGAGGTGGTGGCGGATATGGCGGTGGGCGAGACCGCGGGTACGGAGACGGTGGGTCCCGCTACTCAAGGGGAGGTGGTGCTGCTGATGGAAGCTGGAGGAATTGA 549 0.6157 MASSEIEYRCFVGGLAWATDSDALEKAFAHFGEIVESKVINDRETGRSRGFGFVTFATEQAMRDAIEGMNGQNLDGRNITVNEAQSRGRGGGGGGGGYGSGGGGGGYGGGGYSRGGGGGYGGGGRREGGGGYNRNGGGGYGGGGSGGYGGGGGYGGGRDRGYGDGGSRYSRGGGAADGSWRN* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2411 182 Gene3D - 2 107 IPR012677 -
Dod09g2411 182 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Dod09g2411 182 PANTHER RNA-BINDING PROTEIN GRP1A, PUTATIVE, EXPRESSED-RELATED 1 124 - -
Dod09g2411 182 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Dod09g2411 182 MobiDBLite consensus disorder prediction 123 182 - -
Dod09g2411 182 PANTHER GEO13361P1-RELATED 1 124 - -
Dod09g2411 182 SMART rrm1_1 9 82 IPR000504 GO:0003723
Dod09g2411 182 SUPERFAMILY RNA-binding domain, RBD 9 118 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2411 Dod-Chr9 45308153 45309925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2411 10 81 Eukaryotic Initiation Factors Gene Family AT2G23350 43.056 5.29e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2411 - K13195 gmx:100777821 163.696