Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2409 ATGGAAGCCTCCGCCAGCTCCTCCGGCGGCGCCCTGCCGGAGCTAACCAAGCGAACCCCCATTCTGGGCCTGAAGCTCTACGTCTTGATACTCGTTTTTCTCGTGATGGTGTTATCATTCGTGATCGTGATCTTGGTGTGCGTTCGGCGGAGCCGCAAGAAGCGGAAAATGCGAGTGAAGCACAGCTCCGGCACAATCCCGCTGGTGTCAAAGGAGATCATGGAGGTTAATGCATTGGATCTGGCCCACCACCTCAAAATGGAAGACGACGTCGTTGATGTTGATGTTGATGTTGATCAGAATAAGAAGAAGAAGCAGGGGGACGAGCCGGAGATCAAGGTTGAGATTAAGGAAGGGAGAAGAAGGAAGAGGGAGAAAGAGGAGGAGAGTGATGAGGTGTCGGTGGAGTGTCCGAACATAGGGTGGGGGCGGTGGTACAGCCTGAAGGAGCTGCAGGTAGCCACTGATGGGTTTGCGGAAGGGAATGTGATCGGAGAAGGAGGCTATGGAATTGTCTACAGAGGAGTCCTGCACGATGGTTCCGTTGTGGCCGTCAAAAATCTTCTTAACAACAAGGGTCAAGCAGAGAAAGAGTTTAAGGTGGAGGTCGAAGCCATTGGAAAAGTGAGGCATAAGAATTTGGTGCGGTTAGTTGGATATTGTGCAGAAGGTGCTCAGAGGATGCTTGTTTATGAATACGTTGACAATGGAACTTTGGAGCAGTGGCTGCATGGTGATGTAGGGCCTGTTAGCCCCTTGACATGGGATATACGAATGAGGATTGCTGTTGGGACTGCAAAAGGATTAGCCTACTTGCACGAAGGCTTAGAACCCAAAGTTGTGCACCGGGATGTGAAATCCAGTAACATTCTTTTGGACAAAAATTGGAATGCCAAAGTATCAGACTTTGGATTGGCCAAGCTCCTTGGGTCTGAGAGAAGCTATGTGACAACGCGTGTAATGGGGACGTTTGGATATGTTTCACCTGAGTATGCAAGCACGGGAATGCTTAATGAGGGCAGTGATGTGTATAGTTTTGGGATTCTACTTATGGAGCTAATTACAGGAAGAAGTCCCATTGATTATTCTAGACCACCTGCAGAGATGAACTTGGTTGATTGGTTTAAGGGAATGGTAACGAGTCGTCGTGGCGATGAGCTAGTTGATCCATTAATTGAGATTAAGCCCTCTCCAAGATCTTTGAAGCGAGCTTTATTGGTTTGTCTGCGCTGTATAGATTTGGATGTCGGTAAGCGACCAAAGATGGGTCAAATTGTTCACATGCTTGAGGCCGATGATTTTCCCTACCGTTCTGAACATACAATTAGAGAGAGAGATCCTGCTTCCAGTAAAGTTCCTTATCCAACAAGGCTTGTGGGGCCTATCGATAAATCAAGCTGGAGATGA 1407 0.4812 MEASASSSGGALPELTKRTPILGLKLYVLILVFLVMVLSFVIVILVCVRRSRKKRKMRVKHSSGTIPLVSKEIMEVNALDLAHHLKMEDDVVDVDVDVDQNKKKKQGDEPEIKVEIKEGRRRKREKEEESDEVSVECPNIGWGRWYSLKELQVATDGFAEGNVIGEGGYGIVYRGVLHDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVRLVGYCAEGAQRMLVYEYVDNGTLEQWLHGDVGPVSPLTWDIRMRIAVGTAKGLAYLHEGLEPKVVHRDVKSSNILLDKNWNAKVSDFGLAKLLGSERSYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGILLMELITGRSPIDYSRPPAEMNLVDWFKGMVTSRRGDELVDPLIEIKPSPRSLKRALLVCLRCIDLDVGKRPKMGQIVHMLEADDFPYRSEHTIRERDPASSKVPYPTRLVGPIDKSSWR* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2409 468 Pfam Protein kinase domain 160 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g2409 468 ProSitePatterns Protein kinases ATP-binding region signature. 164 186 IPR017441 GO:0005524
Dod09g2409 468 SUPERFAMILY Protein kinase-like (PK-like) 137 430 IPR011009 -
Dod09g2409 468 CDD STKc_IRAK 164 430 - -
Dod09g2409 468 Gene3D Transferase(Phosphotransferase) domain 1 234 444 - -
Dod09g2409 468 Gene3D Phosphorylase Kinase; domain 1 113 233 - -
Dod09g2409 468 ProSiteProfiles Protein kinase domain profile. 158 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g2409 468 Coils Coil 116 136 - -
Dod09g2409 468 SMART serkin_6 158 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g2409 468 PANTHER OS01G0323000 PROTEIN 15 443 - -
Dod09g2409 468 PANTHER OS03G0227900 PROTEIN 15 443 - -
Dod09g2409 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 280 292 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2409 Dod-Chr9 45254218 45258693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2409 138 430 Receptor kinase-like Gene Family AT4G02010 48.148 1.90e-93 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Dod09g2409 Pkinase 3.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2409 - - gmx:100779420 692.575