Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2403 ATGGCTTCGAATTCGGATTCCGATTCCCCACCACCATCTGATTCAGCTTCATCGCAATCCCCGCCACCACCATCCGACTCCTCCTCCTCCTCGCCACCGCCGCCAGAATCCTCCCCATCACCTCCACCACCCTCATCGTCGCCGCCTCCGTCATCACCTCCTCCATCATCACCTCCTCCGTCATCGCCGCCACCGCCAGCAGATGGTGACAATGATGACGAGAAATCTCCGCCACCGCCATCACCCGACAAATCTCCGGCTCCACCGCCTCCGCCGCCGCCTCCGAAAAGTCCACCGCCCCCTTCGAGCCAAGTGTTTTCTCCTCCGCCGCCTTCACGTAATCGATTGGCTCCACCAACGCCGCCGCCACCACCACCACCTCCTAGGTCATCACAAATTGGAAGTAACTCAGACGCATCATCGTCGCCTGGGGACAGCGGGAGCCAGTGGAGCACGAAAGCTGTAGCAGGAATTGCAGCTGGAGCTGGGTTGCTGCTTCTTGTCATGATACTGCTCTTCCTTGCACTTTGTAGAAGGAGGAAGAAGAGATCAGACGCTCCCATCCGTTACTTCAACGCTGCTGGCGATGACGACTATTACAAACGCCAAGCAACGGCTCCAAATCAGTATGGGTACAATAATAAATTAGGTGAGCATGTTCTTAATATACCTCCACCCCCGGGTGCAGCTTGGGGAGCACCACCTCCTCAACGTGTTAGCAGTGACATAAGCAACTCCAGTGGTTACTCTGGCCCCCAAGGTCCGGTGTTGCCACCCCCACACCCAACAGTGGCCCTCGGATTCAACCAGAGCTCCTTTACGTTTGATGAGCTATCGGCTGCCACTGGTGGGTTTGCCCAACGCAACCTGCTGGGTCAAGGTGGGTTCGGATATGTACACAAAGGTGTGCTGCCCAATGGTAAGGAGATAGCCGTGAAAAGCCTCAAATCCACTGGCAGCCAGGGAGACAGAGAGTTCCAAGCTGAGGTTGATACTATCAGTCGTGTCCATCATCGCCATCTTGTCTCACTTGTTGGATACTGCATGGCAGACAGCAAAAAGCTTCTGGTATATGAATTTGTGCCTAACAAAACGCTTGAATACCACCTTCATGGAAAGGATCAACCTGTCATGGGTTGGGATACCAGGCTCCAAATTGCGATTGGATCATCCAAAGGACTTGCTTACTTGCATGAGGACTGTCATCCTCGTATCATTCACCGGGACATAAAGGCTGCAAACATTCTAATTGAAAACAACTTTGAAGCCAAAGTGGCGGATTTTGGATTGGCAAAGTTTAATCAAGACACTAACACTCATGTTTCTACGCGCGTGATGGGAACATTTGGGTATTTGGCTCCTGAGTATGCATCAAGTGGTAAGCTAACCGACAAGTCTGATGTCTTTTCATACGGTATTATGCTTTTGGAGCTAATAACAGGACGACCCCCAGTGGACAACACTGGTGATTACGAAGAGGACAGTTTGGTTGATTGGGCTAGACCACTTTGTGCGAAGGCAATGGAAACTGGAGTGCTTGAAGGACTGGTGGATCCACGTTTAGGAGACAATTATGACAAGCAGGAGATGGCACGTATGGTGGCATGCGCTGGTGCTAGCGTTAGGCACTCAGCAAGGAGGCGCCCAAGAATGAGCCAGATTGTACGAGTACTGGAGGGTGATGTCTCAGTAGATGTGCTGAGTCACGAGGGAGTGAAACCTGGCCAAAGTGGGCTCTTCAGCAGTACAAGCGGCGAATATGACGCTAGCACATACGATGCTGACATGAAGAGGTTCAGGAAACTAGCATTGGATAGCGGCGTTGCAAGCAGTGAGTTCGGTGGGACGAGTGAGTATGGCCTCAACCCTTCCATCTCGAGCAGTGAGCAGTCGTCTATTGAATTTGGCGGCAGGAGGACATCAAGCCGGATGCTTGCACCTTGA 1944 0.5237 MASNSDSDSPPPSDSASSQSPPPPSDSSSSSPPPPESSPSPPPPSSSPPPSSPPPSSPPPSSPPPPADGDNDDEKSPPPPSPDKSPAPPPPPPPPKSPPPPSSQVFSPPPPSRNRLAPPTPPPPPPPPRSSQIGSNSDASSSPGDSGSQWSTKAVAGIAAGAGLLLLVMILLFLALCRRRKKRSDAPIRYFNAAGDDDYYKRQATAPNQYGYNNKLGEHVLNIPPPPGAAWGAPPPQRVSSDISNSSGYSGPQGPVLPPPHPTVALGFNQSSFTFDELSAATGGFAQRNLLGQGGFGYVHKGVLPNGKEIAVKSLKSTGSQGDREFQAEVDTISRVHHRHLVSLVGYCMADSKKLLVYEFVPNKTLEYHLHGKDQPVMGWDTRLQIAIGSSKGLAYLHEDCHPRIIHRDIKAANILIENNFEAKVADFGLAKFNQDTNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSYGIMLLELITGRPPVDNTGDYEEDSLVDWARPLCAKAMETGVLEGLVDPRLGDNYDKQEMARMVACAGASVRHSARRRPRMSQIVRVLEGDVSVDVLSHEGVKPGQSGLFSSTSGEYDASTYDADMKRFRKLALDSGVASSEFGGTSEYGLNPSISSSEQSSIEFGGRRTSSRMLAP* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2403 647 ProSiteProfiles Protein kinase domain profile. 285 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g2403 647 Pfam Protein tyrosine and serine/threonine kinase 288 490 IPR001245 GO:0004672|GO:0006468
Dod09g2403 647 Gene3D Phosphorylase Kinase; domain 1 262 360 - -
Dod09g2403 647 ProSitePatterns Protein kinases ATP-binding region signature. 291 313 IPR017441 GO:0005524
Dod09g2403 647 MobiDBLite consensus disorder prediction 1 150 - -
Dod09g2403 647 MobiDBLite consensus disorder prediction 614 647 - -
Dod09g2403 647 MobiDBLite consensus disorder prediction 238 252 - -
Dod09g2403 647 SMART serkin_6 285 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g2403 647 MobiDBLite consensus disorder prediction 226 255 - -
Dod09g2403 647 SUPERFAMILY Protein kinase-like (PK-like) 265 558 IPR011009 -
Dod09g2403 647 MobiDBLite consensus disorder prediction 614 638 - -
Dod09g2403 647 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK5 9 611 - -
Dod09g2403 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 405 417 IPR008271 GO:0004672|GO:0006468
Dod09g2403 647 MobiDBLite consensus disorder prediction 15 67 - -
Dod09g2403 647 MobiDBLite consensus disorder prediction 80 131 - -
Dod09g2403 647 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 9 611 - -
Dod09g2403 647 MobiDBLite consensus disorder prediction 132 150 - -
Dod09g2403 647 Gene3D Transferase(Phosphotransferase) domain 1 361 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2403 Dod-Chr9 45206238 45209924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2403 143 613 Trihelix Transcription Factor Family AT1G70460 50.104 3.88e-151 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Dod09g2403 PK_Tyr_Ser-Thr 1.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2403 - - gmx:100806299 742.265